RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CSTL1Q9H114 145 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 SCPEP1Q9HB40 452 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 ACSS1Q9NUB1 689 aaPredicted RBP3.28□□□□□ -1.88
VBP1-204ENST00000625964 IRAK4Q9NWZ3 460 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 ABI3Q9P2A4 366 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 PADI1Q9ULC6 663 aa3.28□□□□□ -1.88
VBP1-204ENST00000625964 CGNL1Q0VF96 1302 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 PDS5AQ29RF7 1337 aaKnown RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 FAM237AA0A1B0GTK4 181 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 XPNPEP2O43895 674 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 RTN3O95197 1032 aaPredicted RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 CDH1P12830 882 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 S1PR1P21453 382 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 CORO1AP31146 461 aaKnown RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 PBX3P40426 434 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 USP8P40818 1118 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 FUT6P51993 359 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 F2RL1P55085 397 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 PDE1BQ01064 536 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 FOXM1Q08050 763 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 GOLGA8DPQ0D2H9 430 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 TBCEQ15813 527 aaPredicted RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 CCNG2Q16589 344 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 TSTQ16762 297 aaKnown RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 GFRALQ6UXV0 394 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 DPPA4Q7L190 304 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 ZNF771Q7L3S4 317 aaPredicted RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 CACNA2D4Q7Z3S7 1137 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 CPLX4Q7Z7G2 160 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 RNF113BQ8IZP6 322 aaKnown RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 KBTBD3Q8NAB2 608 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 ETNPPLQ8TBG4 499 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 FAM149B1Q96BN6 582 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 MMABQ96EY8 250 aaPredicted RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 TTC14Q96N46 770 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 NODALQ96S42 347 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 ACOX2Q99424 681 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 SEBOXQ9HB31 216 aaPredicted RBP3.27□□□□□ -1.89
VBP1-204ENST00000625964 DLGAP2Q9P1A6 1054 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 POU2F3Q9UKI9 436 aa3.27□□□□□ -1.89
VBP1-204ENST00000625964 A0A1W2PRG0 241 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 BMPR1BO00238 502 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 SPINT2O43291 252 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 LMX1BO60663 402 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 PAGE4O60829 102 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 IGLV2-11P01706 119 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 SP1P08047 785 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 CETPP11597 493 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 HLA-DOBP13765 273 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 ITGA2P17301 1181 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 GM2AP17900 193 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 BSGP35613 385 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 RGS2P41220 211 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 TAS2R38P59533 333 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 CEBPZQ03701 1054 aaKnown RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 TBX2Q13207 712 aaPredicted RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 RBM39Q14498 530 aaKnown RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 SYT16Q17RD7 645 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 CCDC96Q2M329 555 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 FRG2Q64ET8 278 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 ZNF280DQ6N043 979 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 ADAM5Q6NVV9 412 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 GDPD4Q6W3E5 623 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 FOXL2NBQ6ZUU3 175 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 TMEM219Q86XT9 240 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 LMNTD1Q8N9Z9 388 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 TMEM116Q8NCL8 245 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 DBF4BQ8NFT6 615 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 OR14L1PQ8NHC6 308 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 HMGCLL1Q8TB92 370 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 LNX1Q8TBB1 728 aaPredicted RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 RFFLQ8WZ73 363 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 ABTB1Q969K4 478 aaPredicted RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 IGSF8Q969P0 613 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 CDCA5Q96FF9 252 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 TMEM68Q96MH6 324 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 PCYT2Q99447 389 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 STRA6Q9BX79 667 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 FBRSL1Q9HCM7 1045 aaKnown RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 LIMA1Q9UHB6 759 aaKnown RBP3.26□□□□□ -1.89
VBP1-204ENST00000625964 NOTCH2Q04721 2471 aa3.26□□□□□ -1.89
VBP1-204ENST00000625964 ANTXRLA6NF34 631 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 J3KRW8 73 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 IPO7O95373 1038 aaKnown RBP3.25□□□□□ -1.89
VBP1-204ENST00000625964 TBX18O95935 607 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 HSPA1AP0DMV8 641 aaKnown RBP3.25□□□□□ -1.89
VBP1-204ENST00000625964 HSPA1BP0DMV9 641 aaKnown RBP3.25□□□□□ -1.89
VBP1-204ENST00000625964 MYOD1P15172 320 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 CLCN3P51790 818 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 ARL16Q0P5N6 197 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 CSTF3Q12996 717 aaKnown RBP3.25□□□□□ -1.89
VBP1-204ENST00000625964 CDONQ4KMG0 1287 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 STPG1Q5TH74 334 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 CCDC70Q6NSX1 233 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 TRNP1Q6NT89 227 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 CYP20A1Q6UW02 462 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 DSTYKQ6XUX3 929 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 KMT5CQ86Y97 462 aa3.25□□□□□ -1.89
VBP1-204ENST00000625964 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms