RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 ALG3Q92685 438 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 PLEKHG4BQ96PX9 1271 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 C19orf43Q9BQ61 176 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 CARS2Q9HA77 564 aaKnown RBP12.38□□□□□ -0.43
LINC00963-217ENST00000624009 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 GPR34Q9UPC5 381 aa12.38□□□□□ -0.43
LINC00963-217ENST00000624009 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ZW10O43264 779 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 KRT86O43790 486 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ANXA9O76027 345 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 STK10O94804 968 aaKnown RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 CELA2BP08218 269 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 GLB1P16278 677 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 HLA-DPA1P20036 260 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 CERCAMQ5T4B2 595 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 CCDC181Q5TID7 509 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 KDELC1Q6UW63 502 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 RBM44Q6ZP01 1051 aaKnown RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 TAF8Q7Z7C8 310 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 CDKL3Q8IVW4 592 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 LSMEM2Q8N112 164 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ZNF567Q8N184 647 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 SPC24Q8NBT2 197 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 HES6Q96HZ4 224 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 RIOK2Q9BVS4 552 aaKnown RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 HEMGNQ9BXL5 484 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 KLHL8Q9P2G9 620 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-217ENST00000624009 SUFUQ9UMX1 484 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 ADGRG1Q9Y653 693 aa12.37□□□□□ -0.43
LINC00963-217ENST00000624009 MACROD2A1Z1Q3 448 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 CPED1A4D0V7 1026 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 FAM149AA5PLN7 773 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GOLGA6CA6NDK9 693 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GOLGA6BA6NDN3 693 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 H7C0C1 242 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 FGF1P05230 155 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GOLGA6DP0CG33 693 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 PYGMP11217 842 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 NFKB1P19838 968 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 ATP5OP48047 213 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 WNT3AP56704 352 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 OTUD4Q01804 1114 aaKnown RBP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GALNT3Q14435 633 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 HLTFQ14527 1009 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 NR1D2Q14995 579 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 PTPRRQ15256 657 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 C14orf28Q4W4Y0 310 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 PYCR3Q53H96 274 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 PID1Q7Z2X4 250 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 ZNF438Q7Z4V0 828 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 KLHDC8BQ8IXV7 354 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 TRAM1L1Q8N609 369 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 KYQ8NBH2 561 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 FAM46DQ8NEK8 389 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 SPATA22Q8NHS9 363 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 EID2BQ96D98 161 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 OR2M4Q96R27 311 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 WDR24Q96S15 920 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GBA3Q9H227 469 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 MRPL40Q9NQ50 206 aaKnown RBP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 GOLGA6AQ9NYA3 693 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 CD84Q9UIB8 345 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 AAR2Q9Y312 384 aaKnown RBP12.36□□□□□ -0.43
LINC00963-217ENST00000624009 MGAQ8IWI9 3026 aa12.36□□□□□ -0.43
LINC00963-217ENST00000624009 ADAMTS20P59510 1910 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 TAF4O00268 1085 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 DDX3YO15523 660 aaKnown RBP12.35□□□□□ -0.43
LINC00963-217ENST00000624009 NOBOXO60393 691 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 PMPCBO75439 489 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 FUCA1P04066 466 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 RBP3P10745 1247 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 ADCY8P40145 1251 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 GPR3P46089 330 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 LSSP48449 732 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 CLCNKAP51800 687 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 GEMP55040 296 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 EIF3IQ13347 325 aaKnown RBP12.35□□□□□ -0.43
LINC00963-217ENST00000624009 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
LINC00963-217ENST00000624009 SLC1A5Q15758 541 aa12.35□□□□□ -0.43
LINC00963-217ENST00000624009 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms