RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZSWIM8A7E2V4 1837 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 H3BMM5 538 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 XYLBO75191 536 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 INSRRP14616 1297 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 PAMP19021 973 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 TGM1P22735 817 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 NFKBIAP25963 317 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 CHRNA4P43681 627 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ALDH3A2P51648 485 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 RPS6KA2Q15349 733 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 IQSEC1Q6DN90 963 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ANKRD13BQ86YJ7 626 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 BEST2Q8NFU1 509 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ZFP90Q8TF47 636 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 VPS33AQ96AX1 596 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 EFHD2Q96C19 240 aaPredicted RBP14.07□□□□□ -0.16
LDB3-209ENST00000623056 RNF145Q96MT1 663 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DUSP16Q9BY84 665 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 HPS4Q9NQG7 708 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 MTRRQ9UBK8 725 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ZNF112Q9UJU3 913 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DERAQ9Y315 318 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ASPDHA6ND91 283 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 TOR1BO14657 336 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ALPLP05186 524 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 THRBP10828 461 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 HGFP14210 728 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 TCF3P15923 654 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 HRH2P25021 359 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 FOXA1P55317 472 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DNASE1L3Q13609 305 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DAG1Q14118 895 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ZBTB6Q15916 424 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 GEN1Q17RS7 908 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DPY19L1Q2PZI1 675 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 PGS1Q32NB8 556 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 DCAF15Q66K64 600 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ARHGAP36Q6ZRI8 547 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 NAT16Q8N8M0 369 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 PTCD2Q8WV60 388 aaKnown RBP14.07□□□□□ -0.16
LDB3-209ENST00000623056 C17orf50Q8WW18 174 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 HDAC2Q92769 488 aaKnown RBP14.07□□□□□ -0.16
LDB3-209ENST00000623056 TSPAN17Q96FV3 270 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ZNF419Q96HQ0 510 aaPredicted RBP14.07□□□□□ -0.16
LDB3-209ENST00000623056 TMEM74Q96NL1 305 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 TSGA13Q96PP4 275 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 ATP13A3Q9H7F0 1226 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 MAGEE1Q9HCI5 957 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 TMEM98Q9Y2Y6 226 aa14.07□□□□□ -0.16
LDB3-209ENST00000623056 UPK1AO00322 258 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 KPNA6O60684 536 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 ANXA9O76027 345 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 DDNO94850 711 aaPredicted RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 CDK14O94921 469 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 LBPP18428 481 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 GSSP48637 474 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 CLCN5P51795 746 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 HERVK_113P63132 956 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 PIGFQ07326 219 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 SLC14A2Q15849 920 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 CTF1Q16619 201 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 IMPG1Q17R60 797 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 INAVAQ3KP66 663 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 AASDHQ4L235 1098 aaPredicted RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 GPR158Q5T848 1215 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 HECTD2Q5U5R9 776 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 TAF2Q6P1X5 1199 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 TMEM207Q6UWW9 146 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 KDELC2Q7Z4H8 507 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 RIMKLAQ8IXN7 391 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 C8orf59Q8N0T1 100 aaPredicted RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 LINC01465Q8N7H1 131 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 MUL1Q969V5 352 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 TUBGCP3Q96CW5 907 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 BTN2A3PQ96KV6 586 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 KCNA7Q96RP8 456 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 ERVK-6Q9BXR3 956 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 TUBB1Q9H4B7 451 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 MID1IP1Q9NPA3 183 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 VPS51Q9UID3 782 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 BAG5Q9UL15 447 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 MAGED1Q9Y5V3 778 aaPredicted RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 A0A1W2PP18 115 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 C16orf96A6NNT2 1141 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 UBXN8O00124 270 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 AZIN1O14977 448 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 AXIN1O15169 862 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 UGT2B11O75310 529 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 CES1P23141 567 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 S100A1P23297 94 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 FBXO47Q5MNV8 452 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 ISCA2Q86U28 154 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 SLCO6A1Q86UG4 719 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 APOBEC3FQ8IUX4 373 aaKnown RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 CCDC117Q8IWD4 279 aaPredicted RBP14.06□□□□□ -0.16
LDB3-209ENST00000623056 KIAA2013Q8IYS2 634 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 CLEC4FQ8N1N0 589 aa14.06□□□□□ -0.16
LDB3-209ENST00000623056 S100ZQ8WXG8 99 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms