RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CHST15Q7LFX5 561 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 Q8N9G6 341 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 KIF21AQ7Z4S6 1674 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MYO10Q9HD67 2058 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CLCA1A8K7I4 914 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 ENPP3O14638 875 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MFSD5Q6N075 450 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SP8Q8IXZ3 490 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 GDPD1Q8N9F7 314 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 UBE2E3Q969T4 207 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 FAM163AQ96GL9 167 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 RNF145Q96MT1 663 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MRPL57Q9BQC6 102 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 XPR1Q9UBH6 696 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 NUDT19A8MXV4 375 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 EDF1O60869 148 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 CD79BP40259 229 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 GLRBP48167 497 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 RBP5P82980 135 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 GBE1Q04446 702 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 NIM1KQ8IY84 436 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 TCEAL3Q969E4 200 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 DCPSQ96C86 337 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 NODALQ96S42 347 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 AIF1LQ9BQI0 150 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 KMOO15229 486 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SLC16A3O15427 465 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 PIGRP01833 764 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 NR2F6P10588 404 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MATKP42679 507 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PPP1R3AQ16821 1122 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MAVSQ7Z434 540 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PQLC3Q8N755 202 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SNX18Q96RF0 628 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CORO1BQ9BR76 489 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 AFF4Q9UHB7 1163 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 ZNF221Q9UK13 617 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SLC12A4Q9UP95 1085 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 POLR1AO95602 1720 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 SMCO3A2RU48 225 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 RFPL1O75677 317 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 DPEP1P16444 411 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PPM1FP49593 454 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 LSM3P62310 102 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 MGAT5BQ3V5L5 792 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEB-220ENST00000618972 SH2D5Q6ZV89 423 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 AMIGO1Q86WK6 493 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 LPGAT1Q92604 370 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CERS2Q96G23 380 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 XPNPEP3Q9NQH7 507 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SLC2A6Q9UGQ3 507 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CNOT6Q9ULM6 557 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 RB1P06400 928 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MTHFD1P11586 935 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 EPHA3P29320 983 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 RALGDSQ12967 914 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 ADAM15Q13444 863 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 LSM12Q3MHD2 195 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 HFE2Q6ZVN8 426 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PIWIL3Q7Z3Z3 882 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 DHX35Q9H5Z1 703 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 RBAKQ9NYW8 714 aaPredicted RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 ZNRF3Q9ULT6 936 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 ASB4Q9Y574 426 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 GLRA2P23416 452 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 HADHBP55084 474 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 SEMG2Q02383 582 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 AP3B2Q13367 1082 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 SLC22A10Q63ZE4 541 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 LRRC66Q68CR7 880 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 OR4C6Q8NH72 309 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 ERVK-11Q9UQG0 969 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 OR6C70A6NIJ9 312 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PDCD5O14737 125 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 HUS1O60921 280 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CSH1P0DML2 217 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CSH2P0DML3 217 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 BDNFP23560 247 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 KDELR1P24390 212 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 NAMPTP43490 491 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PTGR1Q14914 329 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MCEEQ96PE7 176 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PCYT2Q99447 389 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 TBCDQ9BTW9 1192 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 RPF1Q9H9Y2 349 aaKnown RBP3.07□□□□□ -1.92
NEB-220ENST00000618972 GTF2A1LQ9UNN4 478 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 IQSEC2Q5JU85 1478 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 L7N2F9 121 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 PRPF4O43172 522 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEB-220ENST00000618972 SH3BGRLO75368 114 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 IFNA10P01566 189 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 IFNA4P05014 189 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MYL9P24844 172 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 MAB21L1Q13394 359 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 NAE1Q13564 534 aa3.07□□□□□ -1.92
NEB-220ENST00000618972 CMC1Q7Z7K0 106 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms