RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 ENTPD4Q9Y227 616 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 PCYT1BQ9Y5K3 369 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 MN1Q10571 1320 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 A0A0U1RQS6 177 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 TRAFD1O14545 582 aaPredicted RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 DPM1O60762 260 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 SPAG6O75602 509 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 RECKO95980 971 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 ANKRD34CP0C6C1 535 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 CDH5P33151 784 aaPredicted RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 PTGIRP43119 386 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 KRT85P78386 507 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 STIM1Q13586 685 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 UGT8Q16880 541 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 RFLNAQ6ZTI6 216 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 Q6ZVL8 140 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
PHF20-216ENST00000617560 NELFBQ8WX92 580 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 THAP4Q8WY91 577 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 C9orf72Q96LT7 481 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 TBC1D29Q9UFV1 150 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 ITGB1BP2Q9UKP3 347 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 ZGRF1Q86YA3 2104 aa13.12□□□□□ -0.31
PHF20-216ENST00000617560 A6NL46 340 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 CREB3O43889 395 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 SMC2O95347 1197 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 SOD1P00441 154 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 TYRP1P17643 537 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 LHCGRP22888 699 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 NDST2P52849 883 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 HDAC4P56524 1084 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 CDK18Q07002 472 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 KRTAP21-3Q3LHN1 58 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 PARP15Q460N3 678 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 PLEKHN1Q494U1 663 aaPredicted RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 IYDQ6PHW0 289 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 FDCSPQ8NFU4 85 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 JOSD2Q8TAC2 188 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
PHF20-216ENST00000617560 FAM81BQ96LP2 452 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 TGM7Q96PF1 710 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 BRD8Q9H0E9 1235 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 CD84Q9UIB8 345 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 KCNK6Q9Y257 313 aa13.11□□□□□ -0.31
PHF20-216ENST00000617560 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 C21orf140B9A014 251 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 ZNF185O15231 689 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 SNX2O60749 519 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 PALMO75781 387 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 CEACAM4O75871 244 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 C9P02748 559 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 PTPN4P29074 926 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 SDC4P31431 198 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 VIPR1P32241 457 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 GPR1P46091 355 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 CSNK1DP48730 415 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 SCNN1BP51168 640 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 EPHA4P54764 986 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 ITGA1P56199 1179 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
PHF20-216ENST00000617560 RAPSNQ13702 412 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 IL11RAQ14626 422 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
PHF20-216ENST00000617560 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 GALNT13Q8IUC8 556 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 UMODL1-AS1Q8N2C9 162 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
PHF20-216ENST00000617560 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
PHF20-216ENST00000617560 DNAJC12Q9UKB3 198 aa13.1□□□□□ -0.31
PHF20-216ENST00000617560 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 GOLGA6L3A6NEY3 463 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 NPIPB15A6NHN6 443 aaPredicted RBP13.09□□□□□ -0.31
PHF20-216ENST00000617560 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 PPP1R3GB7ZBB8 358 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 RASSF9O75901 435 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 FGF5P12034 268 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 PON1P27169 355 aa13.09□□□□□ -0.31
PHF20-216ENST00000617560 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms