RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PARVBQ9HBI1 364 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 MOV10Q9HCE1 1003 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 RASSF1Q9NS23 344 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 COLQQ9Y215 455 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 A0A0A6YYK5 440 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 GSG1L2A8MUP6 293 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 AGRPO00253 132 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 NRP1O14786 923 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PRKCGP05129 697 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 HNRNPA2B1P22626 353 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 PTSQ03393 145 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 MCM6Q14566 821 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ZNF618Q5T7W0 954 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SFR1Q86XK3 245 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DTWD2Q8NBA8 298 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 FAM46DQ8NEK8 389 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ITCHQ96J02 903 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GAL3ST4Q96RP7 486 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PUS3Q9BZE2 481 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 AGPAT5Q9NUQ2 364 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ISPDA4D126 451 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CYP7B1O75881 506 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CST5P28325 142 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 ZNF84P51523 738 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 RABGGTBP53611 331 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 POLR2FP61218 127 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 MESDQ14696 234 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PDK2Q15119 407 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PARP15Q460N3 678 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DUPD1Q68J44 220 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ECHDC2Q86YB7 292 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 RASSF4Q9H2L5 321 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CORO1CQ9ULV4 474 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 PCDHGC5Q9Y5F6 944 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GABRR3A8MPY1 467 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 FSCN2O14926 492 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 LDB2O43679 373 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 IL2RAP01589 272 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CD38P28907 300 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GRIA2P42262 883 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 C1DQ13901 141 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 MOB2Q70IA6 237 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CHST15Q7LFX5 561 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 LRRC49Q8IUZ0 686 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 UNC5BQ8IZJ1 945 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PPWD1Q96BP3 646 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 HSPA12BQ96MM6 686 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GLOD4Q9HC38 313 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CHST11Q9NPF2 352 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GABREP78334 506 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TRAP1Q12931 704 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 SLC13A2Q13183 592 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SF1Q15637 639 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 NEPROQ6NW34 567 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 LRRC8BQ6P9F7 803 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 DDIASQ8IXT1 998 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PM20D2Q8IYS1 436 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZCCHC7Q8N3Z6 543 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 EMC3Q9P0I2 261 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TEX51A0A1B0GUA7 166 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 A8MVJ9 347 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZSCAN9O15535 394 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 LRP3O75074 770 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CPNE3O75131 537 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 FECHP22830 423 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CYP2F1P24903 491 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SLC7A5Q01650 507 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 FAM26DQ5JW98 314 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 FAM20CQ8IXL6 584 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SFXN2Q96NB2 322 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 HPF1Q9NWY4 346 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 IFT52Q9Y366 437 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ADAM18Q9Y3Q7 739 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 E9PMD0 336 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 MAFO75444 373 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 IL1AP01583 271 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TFPIP10646 304 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 C5AR1P21730 350 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 AP1S1P61966 158 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SSX8Q7RTT4 187 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 PCDH20Q8N6Y1 951 aaKnown RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 GIPC3Q8TF64 312 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CCNL2Q96S94 520 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 DCTPP1Q9H773 170 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 ZNF355PQ9NSJ1 428 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 RNF112Q9ULX5 631 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CYP11A1P05108 521 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 HOXD12P35452 270 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TTPAP49638 278 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CCNG1P51959 295 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 STX3Q13277 289 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 CLCA4Q14CN2 919 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.87
LPP-220ENST00000617246 SLC9B1Q4ZJI4 515 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SLC44A4Q53GD3 710 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 BPHLQ86WA6 291 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 RBBP8NLQ8NC74 664 aaPredicted RBP3.34□□□□□ -1.87
LPP-220ENST00000617246 VAT1Q99536 393 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 SCDO00767 359 aa3.34□□□□□ -1.87
LPP-220ENST00000617246 TSPAN6O43657 245 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms