RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 HECTD2Q5U5R9 776 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 ATG16L1Q676U5 607 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 FAM45BPQ6NSW5 357 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 BRAT1Q6PJG6 821 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 EP400NLQ6ZTU2 488 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 TPRG1Q6ZUI0 275 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 MICALCLQ6ZW33 695 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 USP45Q70EL2 814 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 ZSWIM9Q86XI8 627 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CEP97Q8IW35 865 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CACNA2D3Q8IZS8 1091 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PLD6Q8N2A8 252 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CBARPQ8N350 705 aaPredicted RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 KDM1BQ8NB78 822 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 ST13P5Q8NFI4 369 aaPredicted RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 RAB3IL1Q8TBN0 382 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 FAM45AQ8TCE6 357 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 EID2BQ96D98 161 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 SEC16BQ96JE7 1060 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 MCCC1Q96RQ3 725 aaPredicted RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 ELAC2Q9BQ52 826 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PLA2G2FQ9BZM2 168 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 BPIFA1Q9NP55 256 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CLDND1Q9NY35 253 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CRYL1Q9Y2S2 319 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 STARD13Q9Y3M8 1113 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 KIF26AQ9ULI4 1882 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 A0A0U1RQS6 177 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 PRRT4C9JH25 899 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 SNX3O60493 162 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 EDF1O60869 148 aaKnown RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NDUFS3O75489 264 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 ECI2O75521 394 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 KLHL2O95198 593 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 CLDN7O95471 211 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 BGNP21810 368 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NFKBIAP25963 317 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 GJA4P35212 333 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 SLC26A3P40879 764 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 EIF2DP41214 584 aaKnown RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 TTPAP49638 278 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 GSK3AP49840 483 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 IRX4P78413 519 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 XIAPP98170 497 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 CACNG1Q06432 222 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 GRM2Q14416 872 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 TSNAXIP1Q2TAA8 658 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 PREPLQ4J6C6 727 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 ZRANB3Q5FWF4 1079 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 FOXR1Q6PIV2 292 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 CRTC1Q6UUV9 634 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 PARM1Q6UWI2 310 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 CERS6Q6ZMG9 384 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 FAM47EQ6ZV65 393 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 TBC1D1Q86TI0 1168 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 SPATS2Q86XZ4 545 aaKnown RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 ANKS4BQ8N8V4 417 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 PNPLA1Q8N8W4 532 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 CCDC197Q8NCU1 140 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 TTC8Q8TAM2 541 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 HCAR2Q8TDS4 363 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 KLHL32Q96NJ5 620 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NECTIN4Q96NY8 510 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NDNQ99608 321 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 OLFM1Q99784 485 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 KXD1Q9BQD3 176 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 MECRQ9BV79 373 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 C1QTNF1Q9BXJ1 281 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 OSBPL1AQ9BXW6 950 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 BRD9Q9H8M2 597 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 NMRAL1Q9HBL8 299 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 SLCO1B3Q9NPD5 702 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF358Q9NW07 568 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 COPG2Q9UBF2 871 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 IL36AQ9UHA7 158 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 MID2Q9UJV3 735 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 APPL1Q9UKG1 709 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 RUVBL2Q9Y230 463 aaKnown RBP8.88□□□□□ -0.99
CCDC47-207ENST00000612558 MTCH2Q9Y6C9 303 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 SLC30A1Q9Y6M5 507 aa8.88□□□□□ -0.99
CCDC47-207ENST00000612558 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TSPAN11A1L157 253 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 TBC1D3BA6NDS4 549 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 NPIPB15A6NHN6 443 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 LEFTY1O75610 366 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 IL1BP01584 269 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 PRSS56P0CW18 603 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 CPA3P15088 417 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 POU3F3P20264 500 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 GDI1P31150 447 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 LTBRP36941 435 aa8.87□□□□□ -0.99
CCDC47-207ENST00000612558 PPARGP37231 505 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-207ENST00000612558 OPRD1P41143 372 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms