RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 VPS18Q9P253 973 aa18.11■□□□□ 0.49
VCX3A-203ENST00000612369 LRIT1Q9P2V4 623 aa18.11■□□□□ 0.49
VCX3A-203ENST00000612369 SATB2Q9UPW6 733 aa18.11■□□□□ 0.49
VCX3A-203ENST00000612369 ARHGEF17Q96PE2 2063 aaPredicted RBP18.1■□□□□ 0.49
VCX3A-203ENST00000612369 hCG_1818297A0A087WSY0 165 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 CCDC187A0A096LP49 1063 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 A0A1W2PQM1 296 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 D6RAR5 112 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 FGF1P05230 155 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 PTPN3P26045 913 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 PDX1P52945 283 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 LRP8Q14114 963 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 C3orf38Q5JPI3 329 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 HENMT1Q5T8I9 393 aaKnown RBP18.1■□□□□ 0.49
VCX3A-203ENST00000612369 KAZNQ674X7 775 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 DOK6Q6PKX4 331 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 DAAM2Q86T65 1068 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 PDZD3Q86UT5 571 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 CCNJLQ8IV13 435 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 ARL14Q8N4G2 192 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 ZDHHC1Q8WTX9 485 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 TMEM74Q96NL1 305 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 SLC46A1Q96NT5 459 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 OR2M4Q96R27 311 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 WDR24Q96S15 920 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 VAT1Q99536 393 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 STRADBQ9C0K7 418 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 GOLPH3Q9H4A6 298 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 ASCL3Q9NQ33 180 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 SAE1Q9UBE0 346 aaPredicted RBP18.1■□□□□ 0.49
VCX3A-203ENST00000612369 RALYQ9UKM9 306 aaKnown RBP18.1■□□□□ 0.49
VCX3A-203ENST00000612369 RNF215Q9Y6U7 377 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 NBEAQ8NFP9 2946 aa18.1■□□□□ 0.49
VCX3A-203ENST00000612369 BTNL10A8MVZ5 291 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 AK4P27144 223 aaPredicted RBP18.09■□□□□ 0.49
VCX3A-203ENST00000612369 CCKBRP32239 447 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 COPS2P61201 443 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 GALNT3Q14435 633 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 PYCR3Q53H96 274 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 SPRED1Q7Z699 444 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 GALNT13Q8IUC8 556 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 CCDC50Q8IVM0 306 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 PTCD2Q8WV60 388 aaKnown RBP18.09■□□□□ 0.49
VCX3A-203ENST00000612369 SUDS3Q9H7L9 328 aaPredicted RBP18.09■□□□□ 0.49
VCX3A-203ENST00000612369 RMI1Q9H9A7 625 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 NFKBIL1Q9UBC1 381 aaPredicted RBP18.09■□□□□ 0.49
VCX3A-203ENST00000612369 TMEM98Q9Y2Y6 226 aa18.09■□□□□ 0.49
VCX3A-203ENST00000612369 SOWAHDA6NJG2 315 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 HACD1B0YJ81 288 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 CASC3O15234 703 aaKnown RBP18.08■□□□□ 0.48
VCX3A-203ENST00000612369 INPP4BO15327 924 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 ASMTLO95671 621 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 NDST3O95803 873 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 PECAM1P16284 738 aaPredicted RBP18.08■□□□□ 0.48
VCX3A-203ENST00000612369 ITPKBP27987 946 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 INHBCP55103 352 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 ADCY2Q08462 1091 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 NR1D2Q14995 579 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 PCSK7Q16549 785 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 CLPPQ16740 277 aaPredicted RBP18.08■□□□□ 0.48
VCX3A-203ENST00000612369 PDPK2PQ6A1A2 396 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 SLC30A9Q6PML9 568 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 LYSMD3Q7Z3D4 306 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 ZNF438Q7Z4V0 828 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 TMC3Q7Z5M5 1100 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 PRR11Q96HE9 360 aaPredicted RBP18.08■□□□□ 0.48
VCX3A-203ENST00000612369 FAM153AQ9UHL3 310 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 CNOT6Q9ULM6 557 aaKnown RBP18.08■□□□□ 0.48
VCX3A-203ENST00000612369 TFR2Q9UP52 801 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 EFR3BQ9Y2G0 817 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 ST14Q9Y5Y6 855 aa18.08■□□□□ 0.48
VCX3A-203ENST00000612369 A0A1W2PNU3 283 aaPredicted RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 ECEL1O95672 775 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 MT-CYBP00156 380 aaPredicted RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 EPOP01588 193 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 ACTR1BP42025 376 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 GPR3P46089 330 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 DCDC1P59894 354 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 ACTR1AP61163 376 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 B4GALNT1Q00973 533 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 WASHC5Q12768 1159 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 XRCC4Q13426 336 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 BBS12Q6ZW61 710 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 B4GALNT4Q76KP1 1039 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 MARK2Q7KZI7 788 aaKnown RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 KDELC2Q7Z4H8 507 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 TRIM74Q86UV6 250 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 SFTPA2Q8IWL1 248 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 NAGSQ8N159 534 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 Q8N9G6 341 aaPredicted RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 SPATA22Q8NHS9 363 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 HTR3CQ8WXA8 447 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 TMEM159Q96B96 161 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 CCDC97Q96F63 343 aaPredicted RBP18.07■□□□□ 0.48
VCX3A-203ENST00000612369 ZSCAN5AQ9BUG6 496 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 GPR63Q9BZJ6 419 aa18.07■□□□□ 0.48
VCX3A-203ENST00000612369 ZNF711Q9Y462 761 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms