RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SNX1Q13596 522 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 REXO1L1PQ8IX06 675 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 FAM181AQ8N9Y4 354 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 GPR26Q8NDV2 337 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 PTCD2Q8WV60 388 aaKnown RBP25.88■■□□□ 1.73
VEGFA-226ENST00000611736 TMEM168Q9H0V1 697 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 BPIFA1Q9NP55 256 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 PCDHGA1Q9Y5H4 931 aa25.88■■□□□ 1.73
VEGFA-226ENST00000611736 PTPRBP23467 1997 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 SCN8AQ9UQD0 1980 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 LY6G6EA0A0G2JKS1 128 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 FADS2P1A8MWK0 482 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 ZSCAN12O43309 604 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 CKMT1AP12532 417 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 ACP1P24666 158 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 CXCR5P32302 372 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 GNPDA1P46926 289 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 GKN2Q86XP6 184 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 SPATA16Q9BXB7 569 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 FRMD8P1Q9BZ68 369 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-226ENST00000611736 TRMT1Q9NXH9 659 aaKnown RBP25.87■■□□□ 1.73
VEGFA-226ENST00000611736 SUFUQ9UMX1 484 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 SLC17A4Q9Y2C5 497 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 U3KQA8 63 aa25.87■■□□□ 1.73
VEGFA-226ENST00000611736 ARHGEF17Q96PE2 2063 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-226ENST00000611736 CEP104O60308 925 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 FGGP02679 453 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 FUCA1P04066 466 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 BPIP17213 487 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 ADRA1AP35348 466 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 DCDC1P59894 354 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 SPARCL1Q14515 664 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 OASLQ15646 514 aaKnown RBP25.86■■□□□ 1.73
VEGFA-226ENST00000611736 C6orf132Q5T0Z8 1188 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 GLT6D1Q7Z4J2 308 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 TAF8Q7Z7C8 310 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 TTC30BQ8N4P2 665 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 TAB3Q8N5C8 712 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-226ENST00000611736 SCG3Q8WXD2 468 aaKnown RBP25.86■■□□□ 1.73
VEGFA-226ENST00000611736 COX14Q96I36 57 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 PPP1R2P1Q96PQ5 205 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 TRABDQ9H4I3 376 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 RAD18Q9NS91 495 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 HACD3Q9P035 362 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 SIRPGQ9P1W8 387 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 CNOT6Q9ULM6 557 aaKnown RBP25.86■■□□□ 1.73
VEGFA-226ENST00000611736 ZNF148Q9UQR1 794 aa25.86■■□□□ 1.73
VEGFA-226ENST00000611736 METTL18O95568 372 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 ASMTLO95671 621 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 PARP6Q2NL67 630 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 MARK2Q7KZI7 788 aaKnown RBP25.85■■□□□ 1.73
VEGFA-226ENST00000611736 CCL4L1Q8NHW4 92 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 TBL1YQ9BQ87 522 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 BOCQ9BWV1 1114 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 EVA1BQ9NVM1 165 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 GPR34Q9UPC5 381 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 OAS3Q9Y6K5 1087 aaKnown RBP25.85■■□□□ 1.73
VEGFA-226ENST00000611736 RP1P56715 2156 aa25.85■■□□□ 1.73
VEGFA-226ENST00000611736 USP12O75317 370 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 IVLP07476 585 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 DUSP3P51452 185 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-226ENST00000611736 CLDN6P56747 220 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 ILKQ13418 452 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 NR0B2Q15466 257 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 SIX1Q15475 284 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-226ENST00000611736 ZNF569Q5MCW4 686 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 LVRNQ6Q4G3 990 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 RANBP10Q6VN20 620 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 SLC35F3Q8IY50 421 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 SDR16C5Q8N3Y7 309 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 GLMNQ92990 594 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 CDH19Q9H159 772 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 NCKIPSDQ9NZQ3 722 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 NFKBIL1Q9UBC1 381 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-226ENST00000611736 GULP1Q9UBP9 304 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 NEUROG3Q9Y4Z2 214 aa25.84■■□□□ 1.73
VEGFA-226ENST00000611736 CPED1A4D0V7 1026 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 BUD23O43709 281 aaKnown RBP25.83■■□□□ 1.73
VEGFA-226ENST00000611736 IFNB1P01574 187 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 ATP1A1P05023 1023 aaKnown RBP25.83■■□□□ 1.73
VEGFA-226ENST00000611736 HMGCLP35914 325 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 P3H1Q32P28 736 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 TRAM1L1Q8N609 369 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 RTP4Q96DX8 246 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 ZSCAN5AQ9BUG6 496 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 ARFGAP3Q9NP61 516 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 JRKLQ9Y4A0 524 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 GPSM3Q9Y4H4 160 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 IGF2RP11717 2491 aa25.83■■□□□ 1.73
VEGFA-226ENST00000611736 STIP1P31948 543 aaKnown RBP25.82■■□□□ 1.72
VEGFA-226ENST00000611736 LONRF2Q1L5Z9 754 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 GUSBP11Q6P575 273 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 MARCH9Q86YJ5 346 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 KLHDC8BQ8IXV7 354 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 SLC35F6Q8N357 371 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 KYQ8NBH2 561 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 FAM46DQ8NEK8 389 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 IFI44Q8TCB0 444 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 LRRC45Q96CN5 670 aa25.82■■□□□ 1.72
VEGFA-226ENST00000611736 IL17CQ9P0M4 197 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms