RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 MAPKAPK3Q16644 382 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PIGGQ5H8A4 983 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 OGFRL1Q5TC84 451 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 BNIPLQ7Z465 357 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 CPNE9Q8IYJ1 553 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 C8orf59Q8N0T1 100 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PTCD2Q8WV60 388 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 TMIGD2Q96BF3 282 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 CENPNQ96H22 339 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 GLT1D1Q96MS3 346 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ACBD6Q9BR61 282 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PLGRKTQ9HBL7 147 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 DAPK2Q9UIK4 370 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 POLR3HQ9Y535 204 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 RAD51BO15315 384 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 RPP40O75818 363 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 LRATO95237 230 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ESRRBO95718 433 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 CST1P01037 141 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 FGF1P05230 155 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ATXN8OSP0DMR3 200 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ITGALP20701 1170 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 KCNA5P22460 613 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 GLDCP23378 1020 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 IGFBP6P24592 240 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ACVRL1P37023 503 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 HALP42357 657 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 MAGEA3P43357 314 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 SERPINB10P48595 397 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 HCAR3P49019 387 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PCYT1AP49585 367 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 GPR15P49685 360 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PRKCQQ04759 706 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 LCP2Q13094 533 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 DUSP4Q13115 394 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 HERC3Q15034 1050 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 AP5B1Q2VPB7 878 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF792Q3KQV3 632 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 CHSY3Q70JA7 882 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 LRRC49Q8IUZ0 686 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 NKAPQ8N5F7 415 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 FBXL20Q96IG2 436 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC45A3Q96JT2 553 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 CHID1Q9BWS9 393 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 GALPQ9UBC7 116 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 PCDHGB4Q9UN71 923 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 HS3ST4Q9Y661 456 aa6.84□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC7A4O43246 635 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SNAP91O60641 907 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 VPS4BO75351 444 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MLYCDO95822 493 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 CYBBP04839 570 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 ALDH2P05091 517 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MBL2P11226 248 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 RHOQP17081 205 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HLA-DPA1P20036 260 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 PPP3CCP48454 512 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 ARSDP51689 593 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 POLR2JP52435 117 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MERTKQ12866 999 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 LSAMPQ13449 338 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 GRB7Q14451 532 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 NR1D2Q14995 579 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SIRPB2Q5JXA9 342 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 XKR5Q6UX68 686 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 FAM151BQ6UXP7 276 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 BRI3BPQ8WY22 251 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SLC29A1Q99808 456 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 KLHL25Q9H0H3 589 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 RERGLQ9H628 205 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 WDR6Q9NNW5 1121 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MIOSQ9NXC5 875 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SMPD3Q9NY59 655 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MARCH4Q9P2E8 410 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 GMPR2Q9P2T1 348 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 SCN9AQ15858 1988 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 TCAF2A6NFQ2 919 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 CDC7O00311 574 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 PTGESO14684 152 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HTRA2O43464 458 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 NIPSNAP2O75323 286 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 GPR32O75388 356 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 MYO1DO94832 1006 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 NTRK1P04629 796 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HSMCR30P0CW71 290 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HAPLN1P10915 354 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 CCNA2P20248 432 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 LPOP22079 712 aaPredicted RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 PSMD7P51665 324 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 DGKQP52824 942 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HERVK_113P63132 956 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 HSPA14Q0VDF9 509 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 BOP1Q14137 746 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 ALFQ53S48 1182 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 PGM2L1Q6PCE3 622 aa6.83□□□□□ -1.32
SYNPO2-206ENST00000610556 KCTD8Q6ZWB6 473 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms