RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 LGALS12Q96DT0 336 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 P2RX7Q99572 595 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 WDR27A2RRH5 827 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PABPN1LA6NDY0 278 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CCDC154A6NI56 674 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 E5RI56 91 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 XPNPEP2O43895 674 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 GDF11O95390 407 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 MT-CO1P00395 513 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 EGFRP00533 1210 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PCMT1P22061 227 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 GNA15P30679 374 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PTPN7P35236 360 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 HAAOP46952 286 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PGGT1BP53609 377 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 POU5F1BQ06416 359 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PDK2Q15119 407 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 LRRC38Q5VT99 294 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 HMGCLL1Q8TB92 370 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CDKL2Q92772 493 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 SLC45A3Q96JT2 553 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 SIGLEC10Q96LC7 697 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CAB39LQ9H9S4 337 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZFP14Q9HCL3 533 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 FANCFQ9NPI8 374 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 SIPA1L1O43166 1804 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 H0Y626 953 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 KRT19P08727 400 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 NCK1P16333 377 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TGM2P21980 687 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TALDO1P37837 337 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 YBX1P67809 324 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TPRG1LQ5T0D9 272 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 FAM219BQ5XKK7 198 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CHDHQ8NE62 594 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TRPV3Q8NET8 790 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZBTB20Q9HC78 741 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 DIMT1Q9UNQ2 313 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 IGKV6D-41A0A0C4DH26 115 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 C7P10643 843 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 BMP1P13497 986 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CNTFP26441 200 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 RFC2P35250 354 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TRAF3Q13114 568 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PARP15Q460N3 678 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PYCR3Q53H96 274 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZBTB44Q8NCP5 570 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TESCQ96BS2 214 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF300Q96RE9 604 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 HDHD5Q9BXW7 423 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM8AQ9HCN3 771 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF224Q9NZL3 707 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
CTCFL-218ENST00000608440 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 H3BMM5 538 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 APOC4-APOC2K7ER74 178 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 NDUFA2O43678 99 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 SOAT2O75908 522 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 LRIG2O94898 1065 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 APOC2P02655 101 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 DNTTP04053 509 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 PSMA2P25787 234 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 GMPSP49915 693 aaPredicted RBP12.52□□□□□ -0.41
CTCFL-218ENST00000608440 SRP54P61011 504 aaKnown RBP12.52□□□□□ -0.41
CTCFL-218ENST00000608440 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
CTCFL-218ENST00000608440 KRR1Q13601 381 aaKnown RBP12.52□□□□□ -0.41
CTCFL-218ENST00000608440 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.41
CTCFL-218ENST00000608440 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms