RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RNF215Q9Y6U7 377 aa12.23□□□□□ -0.45
CTSA-210ENST00000606000 ADAMTS20P59510 1910 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 A0A1W2PQM1 296 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 PDE2AO00408 941 aaPredicted RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 FTCDO95954 541 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 RPLP0P05388 317 aaKnown RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 IVLP07476 585 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CTNNA2P26232 953 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 RBL1P28749 1068 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 ADCY8P40145 1251 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CCL7P80098 99 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CTBSQ01459 385 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 OTUD4Q01804 1114 aaKnown RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 HENMT1Q5T8I9 393 aaKnown RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 KDELC1Q6UW63 502 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 B3GNT8Q7Z7M8 397 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 NRSN1Q8IZ57 195 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 Q8N9G6 341 aaPredicted RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 ACTL9Q8TC94 416 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 HNRNPLLQ8WVV9 542 aaKnown RBP12.22□□□□□ -0.45
CTSA-210ENST00000606000 HTR3CQ8WXA8 447 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 COX14Q96I36 57 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 GORASP1Q9BQQ3 440 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 TAAR2Q9P1P5 351 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 DNPEPQ9ULA0 475 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTSA-210ENST00000606000 GPSM3Q9Y4H4 160 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CAPN6Q9Y6Q1 641 aa12.22□□□□□ -0.45
CTSA-210ENST00000606000 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 H7C0C1 242 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 AGRPO00253 132 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 NTN3O00634 580 aaPredicted RBP12.21□□□□□ -0.45
CTSA-210ENST00000606000 APOC2P02655 101 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 FGF1P05230 155 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 PYGMP11217 842 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 ATP5OP48047 213 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 WNT3AP56704 352 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 GABREP78334 506 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 ILF3Q12906 894 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTSA-210ENST00000606000 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTSA-210ENST00000606000 COL28A1Q2UY09 1125 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 PYCR3Q53H96 274 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 CERCAMQ5T4B2 595 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 OGFOD3Q6PK18 319 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
CTSA-210ENST00000606000 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.45
CTSA-210ENST00000606000 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 SLC25A41Q8N5S1 370 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 MRGPRX2Q96LB1 330 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 OR2M4Q96R27 311 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 GSDMCQ9BYG8 508 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 FOXP3Q9BZS1 431 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 FAM83DQ9H4H8 585 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 ZFYVE1Q9HBF4 777 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 PKD2L2Q9NZM6 624 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 IMPACTQ9P2X3 320 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
CTSA-210ENST00000606000 SATB2Q9UPW6 733 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 IGF2RP11717 2491 aa12.21□□□□□ -0.45
CTSA-210ENST00000606000 FREM2Q5SZK8 3169 aa12.21□□□□□ -0.46
CTSA-210ENST00000606000 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.46
CTSA-210ENST00000606000 RP1P56715 2156 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ZFC3H1O60293 1989 aaKnown RBP12.2□□□□□ -0.46
CTSA-210ENST00000606000 CCDC66A2RUB6 948 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 DDX3YO15523 660 aaKnown RBP12.2□□□□□ -0.46
CTSA-210ENST00000606000 DNAJC6O75061 913 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ASMTLO95671 621 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ECEL1O95672 775 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 NDST3O95803 873 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 EML2O95834 649 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ITPKBP27987 946 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ACTR1BP42025 376 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 RWDD2BP57060 319 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 ACTR1AP61163 376 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 OLIG2Q13516 323 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 SPIDRQ14159 915 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 CCDC181Q5TID7 509 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 TMPRSS9Q7Z410 1059 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 TMC3Q7Z5M5 1100 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 NLRP8Q86W28 1048 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 CCNJLQ8IV13 435 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 NAGSQ8N159 534 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 IPMKQ8NFU5 416 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 CCHCR1Q8TD31 782 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
CTSA-210ENST00000606000 FCRL5Q96RD9 977 aa12.2□□□□□ -0.46
CTSA-210ENST00000606000 SPATA16Q9BXB7 569 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms