RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 RPL10P27635 214 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 APLP1P51693 650 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CLCQ05315 142 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TAF10Q12962 218 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TRIM32Q13049 653 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 NHSL2Q5HYW2 709 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CLLU1OSQ5K130 101 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TBCELQ5QJ74 424 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 NADSYN1Q6IA69 706 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 GLB1LQ6UWU2 654 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TRIB2Q92519 343 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TMIGD2Q96BF3 282 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 HOPXQ9BPY8 73 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TFB2MQ9H5Q4 396 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 SDR39U1Q9NRG7 319 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CCM2LQ9NUG4 571 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 HACD3Q9P035 362 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 SLC27A5Q9Y2P5 690 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 MED16Q9Y2X0 877 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 TIMM22Q9Y584 194 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 CEPT1Q9Y6K0 416 aa20.15■□□□□ 0.82
SHKBP1-225ENST00000600733 ARHGAP10A1A4S6 786 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 H3BNH8 94 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 CDH2P19022 906 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 SLC6A2P23975 617 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 FMO4P31512 558 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 SLC5A2P31639 672 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 ARPP19P56211 112 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 SETMARQ53H47 684 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 VARS2Q5ST30 1063 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 PPP4R4Q6NUP7 873 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 RTN4RL1Q86UN2 441 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 TRIML2Q8N7C3 387 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 CDKN2AIPNLQ96HQ2 116 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 RNF112Q9ULX5 631 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 PCDHB5Q9Y5E4 795 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 GREB1Q4ZG55 1949 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 DHRS12A0PJE2 317 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 PDLIM1O00151 329 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 RHOBTB1O94844 696 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 LBPP18428 481 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 DSC1Q08554 894 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 RPS6KA2Q15349 733 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 TSNQ15631 228 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 KCNA10Q16322 511 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 CBR4Q8N4T8 237 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 MINDY1Q8N5J2 469 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 PEX13Q92968 403 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 NSMCE3Q96MG7 304 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 SMIM14Q96QK8 99 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 TCF12Q99081 682 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 ANKRD60Q9BZ19 345 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 POPDC3Q9HBV1 291 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 MYRFQ9Y2G1 1151 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 SPO11Q9Y5K1 396 aa20.14■□□□□ 0.81
SHKBP1-225ENST00000600733 CROCCQ5TZA2 2017 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 VWA8A3KMH1 1905 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 NCF1BA6NI72 391 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 NCF1CA8MVU1 366 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 KERAO60938 352 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 SERPINF2P08697 491 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 NCF1P14598 390 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ZNF23P17027 643 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 OGNP20774 298 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 PRDX3P30048 256 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 OXTRP30559 389 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ATP6V0D1P61421 351 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 LCP2Q13094 533 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 TYSND1Q2T9J0 566 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 BORAQ6PGQ7 559 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ARHGAP22Q7Z5H3 698 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 EPHX4Q8IUS5 362 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 FBXO39Q8N4B4 442 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 FAM47BQ8NA70 645 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 KIAA1191Q96A73 305 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ZUFSPQ96AP4 578 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 LRRC58Q96CX6 371 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 RMND5BQ96G75 393 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 TEX37Q96LM6 180 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 PDFQ9HBH1 243 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 PNPLA3Q9NST1 481 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ANKRD36A6QL64 1941 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 CDC7O00311 574 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 GNAO1P09471 354 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 HOXB8P17481 243 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 CDH15P55291 814 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 PLOD1Q02809 727 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ADRM1Q16186 407 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 COLGALT2Q8IYK4 626 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 STAG3L4Q8TBR4 150 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 VPS33AQ96AX1 596 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 EXOC2Q96KP1 924 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 RPL10LQ96L21 214 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 HAUS8Q9BT25 410 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 CCSER2Q9H7U1 834 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 IL37Q9NZH6 218 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 GALPQ9UBC7 116 aa20.13■□□□□ 0.81
SHKBP1-225ENST00000600733 ADAMTS4O75173 837 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 ECI2O75521 394 aa20.12■□□□□ 0.81
SHKBP1-225ENST00000600733 CRCPO75575 148 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms