RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SMIM14Q96QK8 99 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 OR2M4Q96R27 311 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 RIOK2Q9BVS4 552 aaKnown RBP15.72■□□□□ 0.11
VRK3-221ENST00000600284 FOXP3Q9BZS1 431 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 PKD2L2Q9NZM6 624 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 VPS18Q9P253 973 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 ACSL6Q9UKU0 697 aa15.72■□□□□ 0.11
VRK3-221ENST00000600284 LOC400499M0QZD8 3231 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 C1orf232A0A0U1RR37 186 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 ECEL1O95672 775 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 CPNE6O95741 557 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 AK4P27144 223 aaPredicted RBP15.71■□□□□ 0.11
VRK3-221ENST00000600284 NR2C2P49116 596 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 SPINT3P49223 89 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 AP1B1Q10567 949 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 ZBTB17Q13105 803 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 SLC14A2Q15849 920 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 QPCTQ16769 361 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 SLC30A9Q6PML9 568 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 PIM3Q86V86 326 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 RNF214Q8ND24 703 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 LRRN4Q8WUT4 740 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 PTCD2Q8WV60 388 aaKnown RBP15.71■□□□□ 0.11
VRK3-221ENST00000600284 OLFM3Q96PB7 478 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 AGAP2Q99490 1192 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 CMKLR1Q99788 373 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 FAM83DQ9H4H8 585 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 SUDS3Q9H7L9 328 aaPredicted RBP15.71■□□□□ 0.11
VRK3-221ENST00000600284 TMEM98Q9Y2Y6 226 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 ST14Q9Y5Y6 855 aa15.71■□□□□ 0.11
VRK3-221ENST00000600284 ATRXP46100 2492 aa15.71■□□□□ 0.1
VRK3-221ENST00000600284 BPTFQ12830 3046 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 PMS2P1A4D2B8 440 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 B4GAT1O43505 415 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 KRT1P04264 644 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 ACTR1BP42025 376 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 HADHBP55084 474 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 MAZP56270 477 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 ACTR1AP61163 376 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 RHDQ02161 417 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 SQSTM1Q13501 440 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 HENMT1Q5T8I9 393 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 DOK6Q6PKX4 331 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 SARM1Q6SZW1 724 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 NT5DC3Q86UY8 548 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 RFX6Q8HWS3 928 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 GALNT13Q8IUC8 556 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 SLITRK4Q8IW52 837 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 NAGSQ8N159 534 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 RNF25Q96BH1 459 aaPredicted RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 IMP4Q96G21 291 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 WDR24Q96S15 920 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 SRPK1Q96SB4 655 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 DPYSL5Q9BPU6 564 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 SLC25A51Q9H1U9 297 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 RMI1Q9H9A7 625 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 MAGEE1Q9HCI5 957 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 RAD18Q9NS91 495 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 ATXN7L1Q9ULK2 861 aaPredicted RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 LOXL2Q9Y4K0 774 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 ARHGEF17Q96PE2 2063 aaPredicted RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 SMG1Q96Q15 3661 aaKnown RBP15.7■□□□□ 0.1
VRK3-221ENST00000600284 UNC13CQ8NB66 2214 aa15.7■□□□□ 0.1
VRK3-221ENST00000600284 ERVH48-1M5A8F1 160 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 PSTPIP1O43586 416 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 DNAJC6O75061 913 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 ASMTLO95671 621 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 JMJD7P0C870 316 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 COMTP21964 271 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 ALDH4A1P30038 563 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 SLC5A2P31639 672 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 OR1D5P58170 312 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 VAC14Q08AM6 782 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 BIRC2Q13490 618 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 TFDP2Q14188 446 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 TAZQ16635 292 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 TEX44Q53QW1 395 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 SLC39A7Q92504 469 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 TADA1Q96BN2 335 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 WBP1Q96G27 269 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 TRIB3Q96RU7 358 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 ZFYVE1Q9HBF4 777 aa15.69■□□□□ 0.1
VRK3-221ENST00000600284 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.69■□□□□ 0.1
VRK3-221ENST00000600284 AKAP7Q9P0M2 348 aaPredicted RBP15.69■□□□□ 0.1
VRK3-221ENST00000600284 CNOT6Q9ULM6 557 aaKnown RBP15.69■□□□□ 0.1
VRK3-221ENST00000600284 KIF26BQ2KJY2 2108 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 HGSO14964 777 aaPredicted RBP15.68■□□□□ 0.1
VRK3-221ENST00000600284 PPM1DO15297 605 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 INPP4BO15327 924 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 SPOPO43791 374 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 LCA5LO95447 670 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 CDKN2BP42772 138 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 MAGEA1P43355 309 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 FASLGP48023 281 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 CDK18Q07002 472 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 CLN3Q13286 438 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 TRA2AQ13595 282 aaKnown RBP eCLIP15.68■□□□□ 0.1
VRK3-221ENST00000600284 MAP9Q49MG5 647 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms