RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 HERPUD2Q9BSE4 406 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 GSDMCQ9BYG8 508 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 GPR63Q9BZJ6 419 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 NRSN2Q9GZP1 204 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 C10orf88Q9H8K7 445 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 DKK4Q9UBT3 224 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 FAM153AQ9UHL3 310 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 PCDHB1Q9Y5F3 818 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 URB1O60287 2271 aaKnown RBP22.47■■□□□ 1.19
CCDC9-204ENST00000599398 ASMTLO95671 621 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 PTMAP06454 111 aaKnown RBP22.47■■□□□ 1.19
CCDC9-204ENST00000599398 IVLP07476 585 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 OTUD4Q01804 1114 aaKnown RBP22.47■■□□□ 1.19
CCDC9-204ENST00000599398 XRCC4Q13426 336 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 AADACL2Q6P093 401 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 MARK2Q7KZI7 788 aaKnown RBP22.47■■□□□ 1.19
CCDC9-204ENST00000599398 UBL4BQ8N7F7 174 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 ACTL9Q8TC94 416 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 MAGEE1Q9HCI5 957 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 TRNAU1APQ9NX07 287 aaKnown RBP22.47■■□□□ 1.19
CCDC9-204ENST00000599398 EFR3BQ9Y2G0 817 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 ZNF711Q9Y462 761 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 GPSM3Q9Y4H4 160 aa22.47■■□□□ 1.19
CCDC9-204ENST00000599398 PKD1L2Q7Z442 2459 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 RGSL1A5PLK6 1076 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 PYGMP11217 842 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 AK4P27144 223 aaPredicted RBP22.46■■□□□ 1.19
CCDC9-204ENST00000599398 RBL1P28749 1068 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 PTPN7P35236 360 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 WNT3AP56704 352 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 GSDMDP57764 484 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 HENMT1Q5T8I9 393 aaKnown RBP22.46■■□□□ 1.19
CCDC9-204ENST00000599398 ALS2CLQ60I27 953 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 SLC30A9Q6PML9 568 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 RBM44Q6ZP01 1051 aaKnown RBP22.46■■□□□ 1.19
CCDC9-204ENST00000599398 GPR156Q8NFN8 814 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 OR6C4Q8NGE1 309 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 GPBAR1Q8TDU6 330 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 WDR24Q96S15 920 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 FAM118BQ9BPY3 351 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 CDH19Q9H159 772 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 RSPH14Q9UHP6 348 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 TRHDEQ9UKU6 1024 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 PACSIN2Q9UNF0 486 aaPredicted RBP22.46■■□□□ 1.19
CCDC9-204ENST00000599398 RAXQ9Y2V3 346 aa22.46■■□□□ 1.19
CCDC9-204ENST00000599398 UNC13CQ8NB66 2214 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 USP12O75317 370 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 TJP3O95049 919 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 FTCDO95954 541 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 ADCY8P40145 1251 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 EIF3EP60228 445 aaKnown RBP22.45■■□□□ 1.18
CCDC9-204ENST00000599398 CTBSQ01459 385 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 SPIDRQ14159 915 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 RTP5Q14D33 572 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 OGFOD3Q6PK18 319 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 KDELC1Q6UW63 502 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 NRROSQ86YC3 692 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 CDKL3Q8IVW4 592 aaPredicted RBP22.45■■□□□ 1.18
CCDC9-204ENST00000599398 SFTPA2Q8IWL1 248 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 SLC25A41Q8N5S1 370 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 WDR48Q8TAF3 677 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 EID2BQ96D98 161 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 COX14Q96I36 57 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 OR2M4Q96R27 311 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 FCRL5Q96RD9 977 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 SPATA16Q9BXB7 569 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 SPATS2LQ9NUQ6 558 aaKnown RBP22.45■■□□□ 1.18
CCDC9-204ENST00000599398 TAAR2Q9P1P5 351 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 RABGEF1Q9UJ41 708 aa22.45■■□□□ 1.18
CCDC9-204ENST00000599398 FADS2P1A8MWK0 482 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 MIF4GDA9UHW6 222 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 CASC3O15234 703 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 ZFC3H1O60293 1989 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 NOBOXO60393 691 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 ATP1A1P05023 1023 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 ISXQ2M1V0 245 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 C14orf28Q4W4Y0 310 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 DARS2Q6PI48 645 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 TMC3Q7Z5M5 1100 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 GALNT13Q8IUC8 556 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 IPMKQ8NFU5 416 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 ZDHHC1Q8WTX9 485 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 OXNAD1Q96HP4 312 aaPredicted RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 SRPK1Q96SB4 655 aaKnown RBP22.44■■□□□ 1.18
CCDC9-204ENST00000599398 RAD18Q9NS91 495 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 ZNHIT2Q9UHR6 403 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 SPO11Q9Y5K1 396 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 CFAP47Q6ZTR5 3102 aa22.44■■□□□ 1.18
CCDC9-204ENST00000599398 TCEA3O75764 348 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 RBP3P10745 1247 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 ACTR1BP42025 376 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 ACTR1AP61163 376 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 MPP3Q13368 585 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 Q8N9G6 341 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-204ENST00000599398 GPR26Q8NDV2 337 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 SCARF2Q96GP6 870 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-204ENST00000599398 MRGPRX2Q96LB1 330 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 FSD1LQ9BXM9 530 aa22.43■■□□□ 1.18
CCDC9-204ENST00000599398 CNOT6Q9ULM6 557 aaKnown RBP22.43■■□□□ 1.18
CCDC9-204ENST00000599398 PLEKHM1Q9Y4G2 1056 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms