RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	CDY1	Q9Y6F8	540 aa		5.27	□□□□□ -1.57
PAF1-208	ENST00000598594	SBNO1	A3KN83	1393 aa		5.27	□□□□□ -1.57
PAF1-208	ENST00000598594	NCAPD2	Q15021	1401 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3D	A0A087WVF3	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3I	A0A087WXS9	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3E	A0A087X179	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3K	A0A087X1G2	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ERICH2	A1L162	156 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3B	A6NDS4	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SDR42E2	A6NKP2	422 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ADARB2-AS1	A8MUL3	147 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3L	B9A6J9	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594		K7EQM0	130 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TLR4	O00206	839 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	LGALS8	O00214	317 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CYR61	O00622	381 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	XPO1	O14980	1071 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RRP8	O43159	456 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	DYNC1LI2	O43237	492 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PLRG1	O43660	514 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TSPAN1	O60635	241 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RAD17	O75943	681 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	KLHL2	O95198	593 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CXCL14	O95715	111 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	AGT	P01019	485 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SBK2	P0C263	348 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3H	P0C7X1	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	EBLN1	P0CF75	366 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PRKAR1A	P10644	381 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CYP2C9	P11712	490 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	MMP9	P14780	707 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CYP11B2	P19099	503 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	APEX1	P27695	318 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	OTX2	P32243	289 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CSTF2	P33240	577 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	THBS4	P35443	961 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	KIR3DL1	P43629	444 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CDKN1B	P46527	198 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PCP4	P48539	62 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ZNF135	P52742	658 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	F2RL1	P55085	397 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PRMT2	P55345	433 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SRP54	P61011	504 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	BNIP3	Q12983	259 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PPIL2	Q13356	520 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	GNA13	Q14344	377 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	MAPK11	Q15759	364 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	DUOXA2	Q1HG44	320 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	KRT24	Q2M2I5	525 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SLC36A3	Q495N2	470 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	HSP90AA4P	Q58FG1	418 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SGO1	Q5FBB7	561 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ARMC12	Q5T9G4	340 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	HLA-DQA1	Q5Y7H0	255 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	AFMID	Q63HM1	303 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SLFN13	Q68D06	897 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3G	Q6DHY5	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3C	Q6IPX1	549 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SEPT14	Q6ZU15	432 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	GSTA5	Q7RTV2	222 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	MRPL10	Q7Z7H8	261 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	STK32C	Q86UX6	486 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TPRA1	Q86W33	373 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ZNF280B	Q86YH2	543 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	WFDC8	Q8IUA0	241 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ZDHHC21	Q8IVQ6	265 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CSGALNACT2	Q8N6G5	542 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CLEC1A	Q8NC01	280 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	OR10T2	Q8NGX3	314 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CASKIN2	Q8WXE0	1202 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RAB40A	Q8WXH6	277 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RASD2	Q96D21	266 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ZNF837	Q96EG3	531 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	HMCES	Q96FZ2	354 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	BSCL2	Q96G97	398 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PHACTR3	Q96KR7	559 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	ZNF607	Q96SK3	696 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	COQ7	Q99807	217 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	C19orf43	Q9BQ61	176 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	GPR62	Q9BZJ7	368 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	DDX47	Q9H0S4	455 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SERHL2	Q9H4I8	314 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	RNPEPL1	Q9HAU8	725 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	GLOD4	Q9HC38	313 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	MED4	Q9NPJ6	270 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	LZTFL1	Q9NQ48	299 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	C20orf141	Q9NUB4	165 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	NUDT15	Q9NV35	164 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	EMC3	Q9P0I2	261 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	PTGFRN	Q9P2B2	879 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CNOT8	Q9UFF9	292 aa	Known RBP	5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	CHRNA9	Q9UGM1	479 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	MAGEL2	Q9UJ55	1249 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	HAO1	Q9UJM8	370 aa		5.26	□□□□□ -1.57
PAF1-208	ENST00000598594	TSPAN16	Q9UKR8	245 aa		5.26	□□□□□ -1.57

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