RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CDKN2BP42772 138 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 SLC1A1P43005 524 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 CTBSQ01459 385 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 DPTQ07507 201 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PDK1Q15118 436 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 TCEAL1Q15170 157 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PCSK7Q16549 785 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 CERCAMQ5T4B2 595 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ADAMTSL4Q6UY14 1074 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 GPBAR1Q8TDU6 330 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 WDR24Q96S15 920 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 LRRN3Q9H3W5 708 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 DDX56Q9NY93 547 aaKnown RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 TAAR2Q9P1P5 351 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 LRIT1Q9P2V4 623 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 SLC17A4Q9Y2C5 497 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PRKAB1Q9Y478 270 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PCDHA13Q9Y5I0 950 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 PCYT1BQ9Y5K3 369 aaPredicted RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ALG6Q9Y672 507 aa13.69□□□□□ -0.22
SCAF1-203ENST00000598359 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
SCAF1-203ENST00000598359 ANKRD66B4E2M5 251 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 D6RAR5 112 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 F5H423 210 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 PPP1R12AO14974 1030 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 SLC4A1P02730 911 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 HGFP14210 728 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF30P17039 623 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 TEAD1P28347 426 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 RPL26P61254 145 aaKnown RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ILF3Q12906 894 aaKnown RBP eCLIP13.68□□□□□ -0.224e-8■■□□□ 13.4
SCAF1-203ENST00000598359 SPOCD1Q6ZMY3 1216 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 LYSMD3Q7Z3D4 306 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 TMPRSS9Q7Z410 1059 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 VSIG1Q86XK7 387 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 TMTC1Q8IUR5 882 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 SPACA3Q8IXA5 215 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ZDHHC1Q8WTX9 485 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 EID2BQ96D98 161 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 IMP4Q96G21 291 aaKnown RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ZNF578Q96N58 590 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 GSDMCQ9BYG8 508 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 ARFGAP3Q9NP61 516 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 UBP1Q9NZI7 540 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 RPL26L1Q9UNX3 145 aaKnown RBP13.68□□□□□ -0.22
SCAF1-203ENST00000598359 SHOC2Q9UQ13 582 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 PPP2R2CQ9Y2T4 447 aa13.68□□□□□ -0.22
SCAF1-203ENST00000598359 TRBV23OR9-2A0A075B6M9 112 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 SOWAHDA6NJG2 315 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 CST8O60676 142 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 LCA5LO95447 670 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ASMTLO95671 621 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ECEL1O95672 775 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 IVLP07476 585 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 GLB1P16278 677 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ZFXP17010 805 aaPredicted RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ACTR1BP42025 376 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 SPINT3P49223 89 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 PCBP4P57723 403 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 OR1D5P58170 312 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ACTR1AP61163 376 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 TLE3Q04726 772 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 TAZQ16635 292 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 ALS2CLQ60I27 953 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 NT5DC3Q86UY8 548 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 NRSN1Q8IZ57 195 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 WDR36Q8NI36 951 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 WDR48Q8TAF3 677 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 KRT35Q92764 455 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 COX14Q96I36 57 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 SLC46A1Q96NT5 459 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 TRIB3Q96RU7 358 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 LYSMD1Q96S90 227 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 TRNAU1APQ9NX07 287 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 APPL1Q9UKG1 709 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 CNOT6Q9ULM6 557 aaKnown RBP13.67□□□□□ -0.22
SCAF1-203ENST00000598359 KIF26BQ2KJY2 2108 aa13.67□□□□□ -0.22
SCAF1-203ENST00000598359 CFAP46Q8IYW2 2715 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms