RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PCDHGA8Q9Y5G5 932 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 ASXL3Q9C0F0 2248 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 ASMTLO95671 621 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 ECEL1O95672 775 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 PECAM1P16284 738 aaPredicted RBP14.98□□□□□ -0.01
LIG1-215ENST00000597901 PTPN3P26045 913 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 B4GALNT1Q00973 533 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 CDK18Q07002 472 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 GALNT3Q14435 633 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 PRKD1Q15139 912 aaPredicted RBP14.98□□□□□ -0.01
LIG1-215ENST00000597901 PYCR3Q53H96 274 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 FOXR1Q6PIV2 292 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 SLC30A9Q6PML9 568 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 MARK2Q7KZI7 788 aaKnown RBP14.98□□□□□ -0.01
LIG1-215ENST00000597901 B3GNT8Q7Z7M8 397 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 TMTC1Q8IUR5 882 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 KATNAL2Q8IYT4 538 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 ARL14Q8N4G2 192 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 ZNF248Q8NDW4 579 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 SPATA22Q8NHS9 363 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 TFB1MQ8WVM0 346 aaKnown RBP14.98□□□□□ -0.01
LIG1-215ENST00000597901 ZFYVE1Q9HBF4 777 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 MAGEE1Q9HCI5 957 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 LUC7LQ9NQ29 371 aaKnown RBP14.98□□□□□ -0.01
LIG1-215ENST00000597901 THSD1Q9NS62 852 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 PKD2L2Q9NZM6 624 aa14.98□□□□□ -0.01
LIG1-215ENST00000597901 ANKRD11Q6UB99 2663 aaPredicted RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 ACACAQ13085 2346 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 CCDC187A0A096LP49 1063 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 PMS2P1A4D2B8 440 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 TNFSF15O95150 251 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 NDUFA10O95299 355 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 MT-CYBP00156 380 aaPredicted RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 INHBCP55103 352 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 MAZP56270 477 aaKnown RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 PCBP4P57723 403 aaKnown RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 WASHC5Q12768 1159 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 PEX6Q13608 980 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 PCSK7Q16549 785 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 TFDP3Q5H9I0 405 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 HENMT1Q5T8I9 393 aaKnown RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 LYSMD3Q7Z3D4 306 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 TMC3Q7Z5M5 1100 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 SPRED1Q7Z699 444 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 SPACA3Q8IXA5 215 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 NAGSQ8N159 534 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 P3H4Q92791 437 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 NAF1Q96HR8 494 aaKnown RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 TMEM74Q96NL1 305 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 OR2M4Q96R27 311 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 FOXP3Q9BZS1 431 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 PRORYQ9H606 182 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 ZNHIT2Q9UHR6 403 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 ATXN7L1Q9ULK2 861 aaPredicted RBP14.97□□□□□ -0.01
LIG1-215ENST00000597901 SHOC2Q9UQ13 582 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-215ENST00000597901 MYLKQ15746 1914 aa14.97□□□□□ -0.01
LIG1-215ENST00000597901 ADAMTS20P59510 1910 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 hCG_1818297A0A087WSY0 165 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 RCCD1A6NED2 376 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 SOWAHDA6NJG2 315 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 RHPN2P1A8MT19 583 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 FADS2P1A8MWK0 482 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 D6RAR5 112 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 PMPCBO75439 489 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ATP1A1P05023 1023 aaKnown RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 PIRTP0C851 137 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 FECHP22830 423 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ALDH4A1P30038 563 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 CD68P34810 354 aaPredicted RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 ACTR1BP42025 376 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 MARCKSL1P49006 195 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 OR1D5P58170 312 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ACTR1AP61163 376 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 TLE3Q04726 772 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ZFP36L1Q07352 338 aaKnown RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 SLC14A2Q15849 920 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 C11orf63Q6NUN7 778 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 USP53Q70EK8 1073 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 RAB11FIP2Q7L804 512 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 DAAM2Q86T65 1068 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ZC3H18Q86VM9 953 aaKnown RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 GAS2L3Q86XJ1 694 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 GALNT13Q8IUC8 556 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 FBXO39Q8N4B4 442 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 PATE1Q8WXA2 126 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 KRT35Q92764 455 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 LIN37Q96GY3 246 aaPredicted RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 HEMGNQ9BXL5 484 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 STRADBQ9C0K7 418 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 CDH19Q9H159 772 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 EPB41L5Q9HCM4 733 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 UBP1Q9NZI7 540 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 PRKAB1Q9Y478 270 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 OAS3Q9Y6K5 1087 aaKnown RBP14.96□□□□□ -0.01
LIG1-215ENST00000597901 DUSP10Q9Y6W6 482 aa14.96□□□□□ -0.01
LIG1-215ENST00000597901 ANKRD36A6QL64 1941 aa14.96□□□□□ -0.02
LIG1-215ENST00000597901 TRBV23OR9-2A0A075B6M9 112 aa14.95□□□□□ -0.02
LIG1-215ENST00000597901 CDRT15L2A8MXV6 281 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms