RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CCDC97Q96F63 343 aaPredicted RBP15.43■□□□□ 0.06
SMCO4-206ENST00000596676 APOOQ9BUR5 198 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 SPATA16Q9BXB7 569 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 IL22Q9GZX6 179 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 ZDHHC18Q9NUE0 388 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 NLE1Q9NVX2 485 aaPredicted RBP15.43■□□□□ 0.06
SMCO4-206ENST00000596676 IL1RAPL1Q9NZN1 696 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 PNMA8BQ9ULN7 279 aaPredicted RBP15.43■□□□□ 0.06
SMCO4-206ENST00000596676 PKP3Q9Y446 797 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 HS3ST3A1Q9Y663 406 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 MAD1L1Q9Y6D9 718 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 BPTFQ12830 3046 aa15.43■□□□□ 0.06
SMCO4-206ENST00000596676 A0A1B0GTW7 788 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 CCDC162PA2VCL2 907 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SCAMP1O15126 338 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SLU7O95391 586 aaKnown RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 CFIP05156 583 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 THEGLP0DJG4 465 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SPAM1P38567 509 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 DRG2P55039 364 aaKnown RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 DPTQ07507 201 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SPEM2Q0P670 501 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 PDE1CQ14123 709 aaPredicted RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SF3A2Q15428 464 aaKnown RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 ATP13A5Q4VNC0 1218 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 GLE1Q53GS7 698 aaKnown RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 ZNF542PQ5EBM4 170 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 ZNF765Q7L2R6 523 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 HEATR4Q86WZ0 1026 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 UNC5BQ8IZJ1 945 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 DENND6BQ8NEG7 585 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 STYXQ8WUJ0 223 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 HDAC10Q969S8 669 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 CDKN2AIPNLQ96HQ2 116 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 LOXL4Q96JB6 756 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 KIFC1Q9BW19 673 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 C1QTNF7Q9BXJ2 289 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 PARD6AQ9NPB6 346 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SOX13Q9UN79 622 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 CHMP2BQ9UQN3 213 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 TMEM98Q9Y2Y6 226 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 SNX11Q9Y5W9 270 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 OAS3Q9Y6K5 1087 aaKnown RBP15.42■□□□□ 0.06
SMCO4-206ENST00000596676 RALGAPA1Q6GYQ0 2036 aa15.42■□□□□ 0.06
SMCO4-206ENST00000596676 PLXNB3Q9ULL4 1909 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 GLYATL1P3A0A0U1RQE8 302 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 RGSL1A5PLK6 1076 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 TMEM202A6NGA9 273 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 A6NNZ2 444 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 GOLGA8KD6RF30 607 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 GOLGA8TH3BQL2 631 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 MTX2O75431 263 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 RETP07949 1114 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 F7P08709 466 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-206ENST00000596676 PSMA3P25788 255 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 ARNTP27540 789 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 ECHS1P30084 290 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 MC4RP32245 332 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 TRIM23P36406 574 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 NUDT1P36639 197 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 ELK3P41970 407 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 POLD2P49005 469 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 IRX4P78413 519 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 PDIA2Q13087 525 aaKnown RBP15.41■□□□□ 0.06
SMCO4-206ENST00000596676 NAA30Q147X3 362 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-206ENST00000596676 HIF1AQ16665 826 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 KIF19Q2TAC6 998 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 ANKRD20A4Q4UJ75 823 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 KHDC1Q4VXA5 237 aaKnown RBP15.41■□□□□ 0.06
SMCO4-206ENST00000596676 TRIM61Q5EBN2 209 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 PLA2G2CQ5R387 149 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 KYAT3Q6YP21 454 aaKnown RBP15.41■□□□□ 0.06
SMCO4-206ENST00000596676 MFSD2AQ8NA29 543 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 BBOF1Q8ND07 529 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 STAMBPL1Q96FJ0 436 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 KLHDC7BQ96G42 594 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 GDF3Q9NR23 364 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 TREX1Q9NSU2 369 aa15.41■□□□□ 0.06
SMCO4-206ENST00000596676 ZNF106Q9H2Y7 1883 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 AP3B1O00203 1094 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TLR4O00206 839 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 VILLO15195 856 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 PPFIA2O75334 1257 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 SRP72O76094 671 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 GOT2P00505 430 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 FUCA1P04066 466 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 GNSP15586 552 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 AFF3P51826 1226 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 ARL4CP56559 192 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 DCDC1P59894 354 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 UBAP2Q5T6F2 1119 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 DOK6Q6PKX4 331 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 NLRP8Q86W28 1048 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 CCDC25Q86WR0 208 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 GSPT2Q8IYD1 628 aaKnown RBP15.4■□□□□ 0.06
SMCO4-206ENST00000596676 PIANPQ8IYJ0 282 aa15.4■□□□□ 0.06
SMCO4-206ENST00000596676 TRAM1L1Q8N609 369 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms