RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 AHSGP02765 367 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 EPHX1P07099 455 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 BRAFP15056 766 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 ITGB7P26010 798 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 GABRB3P28472 473 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CXCL12P48061 93 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 SUOXP51687 545 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CTBP1Q13363 440 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CAMK2GQ13555 558 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 CSRP2Q16527 193 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 MROH9Q5TGP6 573 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 FSTL4Q6MZW2 842 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 SH2D5Q6ZV89 423 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 PTAR1Q7Z6K3 402 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 SDCCAG8Q86SQ7 713 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 ZC3HC1Q86WB0 502 aaKnown RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 CILP2Q8IUL8 1156 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 DENND6AQ8IWF6 608 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CHPFQ8IZ52 775 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 ACMSDQ8TDX5 336 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 SUDS3Q9H7L9 328 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 CATSPERZQ9NTU4 200 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 FKBPLQ9UIM3 349 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 C16orf96A6NNT2 1141 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 FOXO6A8MYZ6 492 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 K7ESF4 209 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 KPNA3O00505 521 aaPredicted RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 CCL22O00626 93 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 PRPF4O43172 522 aaKnown RBP eCLIP13.42□□□□□ -0.26
VMP1-217ENST00000593168 RFPL1O75677 317 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 CREB1P16220 341 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 ZNF30P17039 623 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 KRT4P19013 534 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 VIPR1P32241 457 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 SLC1A2P43004 574 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 CD151P48509 253 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 MRPS21P82921 87 aaKnown RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 MPP1Q00013 466 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
VMP1-217ENST00000593168 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 PON2Q15165 354 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 FASTKD1Q53R41 847 aaKnown RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 FAM46CQ5VWP2 391 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 ZDHHC20Q5W0Z9 365 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 LRRC66Q68CR7 880 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 SDE2Q6IQ49 451 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 TRMT11Q7Z4G4 463 aaKnown RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 TTC7BQ86TV6 843 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
VMP1-217ENST00000593168 ISL2Q96A47 359 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 PPP1R16AQ96I34 528 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 VPS39Q96JC1 886 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 SERAC1Q96JX3 654 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 TCF12Q99081 682 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 GPR22Q99680 433 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 GABRG3Q99928 467 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 C2orf42Q9NWW7 574 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 B4GALT6Q9UBX8 382 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 APPL1Q9UKG1 709 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 SARDHQ9UL12 918 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
VMP1-217ENST00000593168 RGSL1A5PLK6 1076 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 ANTXRLA6NF34 631 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 OR51F1A6NGY5 319 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 A6NNZ2 444 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 TYROBPO43914 113 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 S1PR4O95977 384 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 EGFP01133 1207 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 SLC4A1P02730 911 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 LHCGRP22888 699 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 NTSR1P30989 418 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 MC4RP32245 332 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 FOXN2P32314 431 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 TIE1P35590 1138 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 CCNFP41002 786 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 MAGEA12P43365 314 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 XIAPP98170 497 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 PTSQ03393 145 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 PEX6Q13608 980 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 TYSND1Q2T9J0 566 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 TUBB8Q3ZCM7 444 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 FBXO43Q4G163 708 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 Q6ZS52 159 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 PARS2Q7L3T8 475 aaKnown RBP13.41□□□□□ -0.26
VMP1-217ENST00000593168 TSPAN33Q86UF1 283 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 C4orf33Q8N1A6 199 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 SPEM1Q8N4L4 309 aa13.41□□□□□ -0.26
VMP1-217ENST00000593168 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms