RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	NRSN1	Q8IZ57	195 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	COX14	Q96I36	57 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	CATSPER2	Q96P56	530 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412		A8MU76	341 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	PRKAR1A	P10644	381 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZNF135	P52742	658 aa	Predicted RBP	18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	PTS	Q03393	145 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	CDC20	Q12834	499 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	PEX6	Q13608	980 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	ATP1A1-AS1	Q5TC04	95 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	RBM43	Q6ZSC3	357 aa	Known RBP	18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	POLN	Q7Z5Q5	900 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	LURAP1L	Q8IV03	231 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	NLGN4X	Q8N0W4	816 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	C9orf43	Q8TAL5	461 aa	Predicted RBP	18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	AP2M1	Q96CW1	435 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	TEFM	Q96QE5	360 aa	Known RBP	18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	ANAPC2	Q9UJX6	822 aa		18.16	■□□□□ 0.5
CIRBP-238	ENST00000592412	PRRC2C	Q9Y520	2896 aa	Known RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	CAPN5	O15484	640 aa	Predicted RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	DNAJC6	O75061	913 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	RNF8	O76064	485 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	ATP1A3	P13637	1013 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	SMTNL2	Q2TAL5	461 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	RALGPS1	Q5JS13	557 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	SNAP47	Q5SQN1	464 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	ARMC12	Q5T9G4	340 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	E4F1	Q66K89	784 aa	Predicted RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	WDR74	Q6RFH5	385 aa	Predicted RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	USP45	Q70EL2	814 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	CSPG4P5	Q96PW8	444 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	SLC38A3	Q99624	504 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZWILCH	Q9H900	591 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	GPN2	Q9H9Y4	310 aa	Predicted RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	PRKAB1	Q9Y478	270 aa		18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	TMEM184B	Q9Y519	407 aa	Predicted RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412	OAS3	Q9Y6K5	1087 aa	Known RBP	18.15	■□□□□ 0.5
CIRBP-238	ENST00000592412		A6NCN8	305 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	DLGAP3	O95886	979 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	MAP4	P27816	1152 aa	Known RBP	18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	MMP13	P45452	471 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	LRP8	Q14114	963 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	NCAPH	Q15003	741 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	TXNRD3NB	Q6F5E7	133 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	TMCO3	Q6UWJ1	677 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	ZNF765	Q7L2R6	523 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	NLRP8	Q86W28	1048 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	GALNT13	Q8IUC8	556 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	OR10G6	Q8NH81	332 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	ABHD17A	Q96GS6	310 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	AHCYL2	Q96HN2	611 aa	Known RBP	18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	WDR24	Q96S15	920 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	FBXO8	Q9NRD0	319 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	CNOT8	Q9UFF9	292 aa	Known RBP	18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	TBC1D29	Q9UFV1	150 aa		18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412	CNOT6	Q9ULM6	557 aa	Known RBP	18.14	■□□□□ 0.49
CIRBP-238	ENST00000592412		A0A0J9YYE9	177 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412		H3BRJ5	948 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	INPP4B	O15327	924 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	STK17B	O94768	372 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	TRBC1	P01850	177 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	F8A1	P23610	371 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	NFKBIA	P25963	317 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	PCK1	P35558	622 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	STC1	P52823	247 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	HHEX	Q03014	270 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	ABHD18	Q0P651	414 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	NFATC2	Q13469	925 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	DEFB109B	Q30KR1	87 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	MARC1	Q5VT66	337 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	ATPAF2	Q8N5M1	289 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	TEX26	Q8N6G2	289 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	STARD8	Q92502	1023 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	RIOK2	Q9BVS4	552 aa	Known RBP	18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	ZMYND15	Q9H091	742 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	SARS2	Q9NP81	518 aa	Known RBP	18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	NT5M	Q9NPB1	228 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	SIDT1	Q9NXL6	827 aa	Known RBP	18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	CHMP5	Q9NZZ3	219 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	PLAA	Q9Y263	795 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	MAN2B2	Q9Y2E5	1009 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	MRPS18B	Q9Y676	258 aa	Known RBP	18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412	NOTCH2	Q04721	2471 aa		18.13	■□□□□ 0.49
CIRBP-238	ENST00000592412		K7EM74	188 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	DDX3X	O00571	662 aa	Known RBP eCLIP	18.12	■□□□□ 0.49	1e-13	■■■□□ 16.1
CIRBP-238	ENST00000592412	FTL	P02792	175 aa	Predicted RBP	18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	ATP1A1	P05023	1023 aa	Known RBP	18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	GP1BB	P13224	206 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	ANP32A	P39687	249 aa	Known RBP	18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	CDH6	P55285	790 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	MYL5	Q02045	173 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	PPP1R2P3	Q6NXS1	205 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	IYD	Q6PHW0	289 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	CEACAM20	Q6UY09	585 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	EXD1	Q8NHP7	514 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	APOBEC4	Q8WW27	367 aa	Known RBP	18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	NCSTN	Q92542	709 aa		18.12	■□□□□ 0.49
CIRBP-238	ENST00000592412	HSPH1	Q92598	858 aa		18.12	■□□□□ 0.49

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