RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 NDST3O95803 873 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ANXA5P08758 320 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 PKMP14618 531 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 CKMT2P17540 419 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 RAD21L1Q9H4I0 556 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 AP3M1Q9Y2T2 418 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC28A1O00337 649 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 PGGT1BP53609 377 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 RPL26P61254 145 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 FAM151BQ6UXP7 276 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 NECAB2Q7Z6G3 386 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 ADI1Q9BV57 179 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 H3BMM5 538 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 IGSF6O95976 241 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 KCNE1P15382 129 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 NRG1Q02297 640 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 OR2T12Q8NG77 320 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 KIFC1Q9BW19 673 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 BBS2Q9BXC9 721 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 C6orf62Q9GZU0 229 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 RGS5O15539 181 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 BEST1O76090 585 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 LSM3P62310 102 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 HERVK_113P63132 956 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 GIPC3Q8TF64 312 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 ERVK-6Q9BXR3 956 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 OSBPL2Q9H1P3 480 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 NRAPQ86VF7 1730 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 EPN2O95208 641 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 COX7A2P14406 83 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 MTHFRP42898 656 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 EIF2B2P49770 351 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 TSNQ15631 228 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 RGS21Q2M5E4 152 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 CMPK2Q5EBM0 449 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 MCOLN3Q8TDD5 553 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 HMG20AQ9NP66 347 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 GALNT8Q9NY28 637 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 ADGRE2Q9UHX3 823 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 PCDHB9Q9Y5E1 797 aa17.06■□□□□ 0.32
SMARCA4-215ENST00000590574 F8W810 466 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 SOX6P35712 828 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 USP46P62068 366 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CYS1Q717R9 158 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 C11orf74Q86VG3 221 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 OR52E6Q96RD3 313 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 BCAS2O75934 225 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ESAMQ96AP7 390 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 TRIM45Q9H8W5 580 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 TBL1XO60907 577 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 SIX3O95343 332 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 GPIP06744 558 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 HSPA14Q0VDF9 509 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 AP5B1Q2VPB7 878 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ZNF284Q2VY69 593 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 DET1Q7L5Y6 550 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 BNIPLQ7Z465 357 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 TP53INP2Q8IXH6 220 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 STX19Q8N4C7 294 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CANT1Q8WVQ1 401 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 MUC13Q9H3R2 512 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 AKTIPQ9H8T0 292 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 SUCOQ9UBS9 1254 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 DYTNA2CJ06 578 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 TYMPP19971 482 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ST13P50502 369 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 PIM3Q86V86 326 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 OR7A2PQ8NGA2 310 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 HBEGFQ99075 208 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 REEP1Q9H902 201 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 C8orf4Q9NR00 106 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ADPRHL2Q9NX46 363 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 USE1Q9NZ43 259 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 C9IYK1 514 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ALDH1A2O94788 518 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 UROSP10746 265 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 TACR2P21452 398 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 PBX3P40426 434 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 GJA9P57773 515 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CPSF6Q16630 551 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 OR9I1Q8NGQ6 314 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CLHC1Q8NHS4 586 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 ABCG8Q9H221 673 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CRTAC1Q9NQ79 661 aa17.05■□□□□ 0.32
SMARCA4-215ENST00000590574 CNOT3O75175 753 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 URODP06132 367 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 NAPRTQ6XQN6 538 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 RSPH1Q8WYR4 309 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 SNX6Q9UNH7 406 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 LAMB2P55268 1798 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 MTHFD1P11586 935 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 RRM2P31350 389 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 CXCR3P49682 368 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 C11orf96Q7Z7L8 435 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 TRIM69Q86WT6 500 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 SIDT2Q8NBJ9 832 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms