RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 DARS2Q6PI48 645 aaKnown RBP18.12■□□□□ 0.49
DDX39A-212ENST00000590260 DOK6Q6PKX4 331 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 TMPRSS12Q86WS5 348 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 IPMKQ8NFU5 416 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 ATL2Q8NHH9 583 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 IFI44Q8TCB0 444 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 GPBAR1Q8TDU6 330 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 FAM83DQ9H4H8 585 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 CARS2Q9HA77 564 aaKnown RBP18.12■□□□□ 0.49
DDX39A-212ENST00000590260 FREM2Q5SZK8 3169 aa18.12■□□□□ 0.49
DDX39A-212ENST00000590260 OPA1O60313 960 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 NOBOXO60393 691 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 DNAJC6O75061 913 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 ATP1A1P05023 1023 aaKnown RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 IVLP07476 585 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 BPIP17213 487 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 AK4P27144 223 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 MPP3Q13368 585 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 SIX1Q15475 284 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 OGFOD3Q6PK18 319 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 LVRNQ6Q4G3 990 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 EFL1Q7Z2Z2 1120 aaKnown RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 GALNT15Q8N3T1 639 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 GPR156Q8NFN8 814 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 ATG4AQ8WYN0 398 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 HIC2Q96JB3 615 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 SPATA13Q96N96 652 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 KCNF1Q9H3M0 494 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 SUDS3Q9H7L9 328 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 SPATS2LQ9NUQ6 558 aaKnown RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 PKD2L2Q9NZM6 624 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 SIRPGQ9P1W8 387 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 NFKBIL1Q9UBC1 381 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-212ENST00000590260 MOSPD1Q9UJG1 213 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 PPP2R2CQ9Y2T4 447 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 ACACBO00763 2458 aa18.11■□□□□ 0.49
DDX39A-212ENST00000590260 CPED1A4D0V7 1026 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 RGSL1A5PLK6 1076 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 TAF4O00268 1085 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 PDE2AO00408 941 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-212ENST00000590260 SLC4A1P02730 911 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 GP1BAP07359 652 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 CETN2P41208 172 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 GNPDA1P46926 289 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 DCDC1P59894 354 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX39A-212ENST00000590260 NR0B2Q15466 257 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 ZNF648Q5T619 568 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-212ENST00000590260 ALS2CLQ60I27 953 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 DENND5AQ6IQ26 1287 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 RANBP10Q6VN20 620 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 GKN2Q86XP6 184 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 SDR16C5Q8N3Y7 309 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 KDF1Q8NAX2 398 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-212ENST00000590260 CCHCR1Q8TD31 782 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 APOL2Q9BQE5 337 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 FICDQ9BVA6 458 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 TLR10Q9BXR5 811 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 GPR63Q9BZJ6 419 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 BPIFA1Q9NP55 256 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 ARFGAP3Q9NP61 516 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 GPR34Q9UPC5 381 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 ASXL3Q9C0F0 2248 aa18.1■□□□□ 0.49
DDX39A-212ENST00000590260 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 KMT2BQ9UMN6 2715 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 MAP1BP46821 2468 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 GAPDHSO14556 408 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 METTL18O95568 372 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 CDK4P11802 303 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 ADCY8P40145 1251 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 CTBSQ01459 385 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 PTPRCAPQ14761 206 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 OASLQ15646 514 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 KHDC1Q4VXA5 237 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 PYCR3Q53H96 274 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 MICALCLQ6ZW33 695 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 MARK2Q7KZI7 788 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 TAF8Q7Z7C8 310 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 C17orf82Q86X59 251 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 SLC13A5Q86YT5 568 aaPredicted RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 ARL10Q8N8L6 244 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 DCBLD1Q8N8Z6 715 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 TRNAU1APQ9NX07 287 aaKnown RBP18.09■□□□□ 0.49
DDX39A-212ENST00000590260 IL17CQ9P0M4 197 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 GULP1Q9UBP9 304 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 PADI4Q9UM07 663 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 PRKAB1Q9Y478 270 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 USP24Q9UPU5 2620 aa18.09■□□□□ 0.49
DDX39A-212ENST00000590260 GOLGA6L3A6NEY3 463 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 TRABD2BA6NFA1 517 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 GPR39O43194 453 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 BUD23O43709 281 aaKnown RBP18.08■□□□□ 0.48
DDX39A-212ENST00000590260 USP12O75317 370 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 FGF1P05230 155 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 HLA-DPA1P20036 260 aa18.08■□□□□ 0.48
DDX39A-212ENST00000590260 HMGCLP35914 325 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms