RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 CCKBRP32239 447 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 ACTR1BP42025 376 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 ACTR1AP61163 376 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 DPTQ07507 201 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 PPIDQ08752 370 aaKnown RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
RFX1-207ENST00000589937 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 PHF19Q5T6S3 580 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 NKAIN2Q5VXU1 208 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 LYSMD3Q7Z3D4 306 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 KDELC2Q7Z4H8 507 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 ZNF438Q7Z4V0 828 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 C17orf82Q86X59 251 aaPredicted RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 ARL14Q8N4G2 192 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 EID2BQ96D98 161 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 SEMA4CQ9C0C4 833 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 SEPT10Q9P0V9 454 aa12.6□□□□□ -0.39
RFX1-207ENST00000589937 CNOT6Q9ULM6 557 aaKnown RBP12.6□□□□□ -0.39
RFX1-207ENST00000589937 TRBV23OR9-2A0A075B6M9 112 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 PRAMEF33A0A0G2JMD5 474 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 PPM1DO15297 605 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 PRAMEF10O60809 474 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TPM3P06753 285 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 MPSTP25325 297 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TEAD1P28347 426 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 ALDH4A1P30038 563 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 CFHR1Q03591 330 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 AP1B1Q10567 949 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TRIM14Q14142 442 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 PCSK7Q16549 785 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 PYCR3Q53H96 274 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 BROXQ5VW32 411 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 ALS2CLQ60I27 953 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 SLC9A4Q6AI14 798 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 USP53Q70EK8 1073 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 ZNF765Q7L2R6 523 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 VASH2Q86V25 355 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 LRRC49Q8IUZ0 686 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 FATE1Q969F0 183 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 SCARF2Q96GP6 870 aaPredicted RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 COX14Q96I36 57 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 AGAP3Q96P47 875 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 STRADBQ9C0K7 418 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 CDH19Q9H159 772 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TRNAU1APQ9NX07 287 aaKnown RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 SAE1Q9UBE0 346 aaPredicted RBP12.59□□□□□ -0.39
RFX1-207ENST00000589937 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
RFX1-207ENST00000589937 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 RHPN2P1A8MT19 583 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 PDE2AO00408 941 aaPredicted RBP12.58□□□□□ -0.4
RFX1-207ENST00000589937 APOL1O14791 398 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 EFSO43281 561 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 DNAJC6O75061 913 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 MTA2O94776 668 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 JMJD7P0C870 316 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 CCL4P13236 92 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 PECAM1P16284 738 aaPredicted RBP12.58□□□□□ -0.4
RFX1-207ENST00000589937 ZNF30P17039 623 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 MX2P20592 715 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 NFKBIAP25963 317 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 MAPK10P53779 464 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 ADCY2Q08462 1091 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 LY6DQ14210 128 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 NR1D2Q14995 579 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 HENMT1Q5T8I9 393 aaKnown RBP12.58□□□□□ -0.4
RFX1-207ENST00000589937 MFSD7Q6UXD7 560 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 ZFAND4Q86XD8 727 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 RFX6Q8HWS3 928 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 OR6C4Q8NGE1 309 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 SLC37A2Q8TED4 501 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
RFX1-207ENST00000589937 TMEM74Q96NL1 305 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 TRIB3Q96RU7 358 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 DPH1Q9BZG8 443 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 SHOC2Q9UQ13 582 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 KCNK6Q9Y257 313 aa12.58□□□□□ -0.4
RFX1-207ENST00000589937 IGHV5-10-1A0A0J9YXX1 117 aa12.57□□□□□ -0.4
RFX1-207ENST00000589937 C9orf172C9J069 976 aa12.57□□□□□ -0.4
RFX1-207ENST00000589937 ZIC2O95409 532 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms