RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	SECISBP2L	Q93073	1101 aa	Known RBP	5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	GPATCH1	Q9BRR8	931 aa	Known RBP	5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	HGH1	Q9BTY7	390 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	FAM129A	Q9BZQ8	928 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	SPATC1L	Q9H0A9	340 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	GOLPH3L	Q9H4A5	285 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	MAGIX	Q9H6Y5	334 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	DNAJC18	Q9H819	358 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	MAP6D1	Q9H9H5	199 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	OLAH	Q9NV23	265 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	HAO2	Q9NYQ3	351 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	UBA2	Q9UBT2	640 aa	Predicted RBP	5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	HACL1	Q9UJ83	578 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	RCOR1	Q9UKL0	485 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	HS3ST3A1	Q9Y663	406 aa		5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	5.5	□□□□□ -1.53
TUBD1-208	ENST00000588009		A0A1W2PPC1	479 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CPED1	A4D0V7	1026 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MAGEB17	A8MXT2	336 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MATN3	O15232	486 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SPRY1	O43609	319 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	FDPS	P14324	419 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CHRNB2	P17787	502 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	ERCC2	P18074	760 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MAOA	P21397	527 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	UBA1	P22314	1058 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	GPT	P24298	496 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CCR10	P46092	362 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	COMP	P49747	757 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	ID2	Q02363	134 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MYBPC2	Q14324	1141 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SNAPC1	Q16533	368 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CBWD6	Q4V339	395 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CBWD3	Q5JTY5	395 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLC10A5	Q5PT55	438 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	GGNBP1	Q5YKI7	109 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	METTL2B	Q6P1Q9	378 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SUSD1	Q6UWL2	747 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	DEF8	Q6ZN54	512 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CACNA2D4	Q7Z3S7	1137 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MRGPRG	Q86SM5	289 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	PATL1	Q86TB9	770 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	LDB1	Q86U70	411 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	PI4KAP1	Q8N8J0	262 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	OR10S1	Q8NGN2	331 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	ARRDC2	Q8TBH0	407 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	TMEM163	Q8TC26	289 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	HDAC11	Q96DB2	347 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	METTL2A	Q96IZ6	378 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	LINC00615	Q96LM1	132 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	ZNF830	Q96NB3	372 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	GFM1	Q96RP9	751 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	CITED2	Q99967	270 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SYT17	Q9BSW7	474 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLC25A23	Q9BV35	468 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	PPIL3	Q9H2H8	161 aa	Known RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	KCNN2	Q9H2S1	579 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLCO5A1	Q9H2Y9	848 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	KCNK15	Q9H427	330 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	ACSS1	Q9NUB1	689 aa	Predicted RBP	5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	TMEM184C	Q9NVA4	438 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	MSRB1	Q9NZV6	116 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	OR14J1	Q9UGF5	321 aa		5.49	□□□□□ -1.53
TUBD1-208	ENST00000588009	SYNJ2	O15056	1496 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	KANSL1L	A0AUZ9	987 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	WIPF3	A6NGB9	483 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	MANSC4	A6NHS7	340 aa	Predicted RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ATG13	O75143	517 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLCO2B1	O94956	709 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ZWINT	O95229	277 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	PRKCG	P05129	697 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ATP5D	P30049	168 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	HOXC8	P31273	242 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	TLX1	P31314	330 aa	Predicted RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	PIGA	P37287	484 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	MATR3	P43243	847 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	RAB28	P51157	221 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	PROK1	P58294	105 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	SPOCK1	Q08629	439 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLC10A2	Q12908	348 aa	Predicted RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	RALGDS	Q12967	914 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	TNIP1	Q15025	636 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	DUSP6	Q16828	381 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	HYAL4	Q2M3T9	481 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	CAVIN1	Q6NZI2	390 aa	Known RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ZNF788	Q6ZQV5	615 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	SLC16A12	Q6ZSM3	486 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ERN2	Q76MJ5	926 aa	Known RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ADIPOR2	Q86V24	386 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	IQCH	Q86VS3	1027 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	RBM15B	Q8NDT2	890 aa	Known RBP	5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ENGASE	Q8NFI3	743 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	CFAP61	Q8NHU2	1237 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	AFAP1L1	Q8TED9	768 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ARSG	Q96EG1	525 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	ZFYVE19	Q96K21	471 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	DACH2	Q96NX9	599 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	FNBP1	Q96RU3	617 aa		5.48	□□□□□ -1.53
TUBD1-208	ENST00000588009	THUMPD3	Q9BV44	507 aa	Known RBP	5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms