RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GPN2Q9H9Y4 310 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 PARVAQ9NVD7 372 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 SIDT1Q9NXL6 827 aaKnown RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 KCTD5Q9NXV2 234 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 TBC1D29Q9UFV1 150 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 ANAPC2Q9UJX6 822 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 CNOT6Q9ULM6 557 aaKnown RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 PRKAB1Q9Y478 270 aa11.81□□□□□ -0.52
BRCA1-225ENST00000586385 TMEM184BQ9Y519 407 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 OAS3Q9Y6K5 1087 aaKnown RBP11.81□□□□□ -0.52
BRCA1-225ENST00000586385 A0A1W2PQ67 120 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 LRRC10BA6NIK2 292 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 DNAJC6O75061 913 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 STK17BO94768 372 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 PRLP01236 227 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 CYP2A6P11509 494 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-225ENST00000586385 NR1D1P20393 614 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 HSPA9P38646 679 aaKnown RBP11.8□□□□□ -0.52
BRCA1-225ENST00000586385 GPR1P46091 355 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 STC1P52823 247 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 RAB15P59190 212 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 BIRC2Q13490 618 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 DPYSL2Q16555 572 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 WDR74Q6RFH5 385 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-225ENST00000586385 LZTR1Q8N653 840 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 STARD8Q92502 1023 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 AP2M1Q96CW1 435 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 TEFMQ96QE5 360 aaKnown RBP11.8□□□□□ -0.52
BRCA1-225ENST00000586385 FBXO8Q9NRD0 319 aa11.8□□□□□ -0.52
BRCA1-225ENST00000586385 MRPS18BQ9Y676 258 aaKnown RBP11.8□□□□□ -0.52
BRCA1-225ENST00000586385 INPP4BO15327 924 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 CAPN5O15484 640 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ZW10O43264 779 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 PRPSAP2O60256 369 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ATP1A1P05023 1023 aaKnown RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 FERP16591 822 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 MAP4P27816 1152 aaKnown RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 MMP13P45452 471 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 HHEXQ03014 270 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 UBXN1Q04323 297 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ABHD18Q0P651 414 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 NCAPHQ15003 741 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 SMTNL2Q2TAL5 461 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ARMC12Q5T9G4 340 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 IYDQ6PHW0 289 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 USP45Q70EL2 814 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF765Q7L2R6 523 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 NLRP8Q86W28 1048 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 TEX26Q8N6G2 289 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 OR10G6Q8NH81 332 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 SLC38A3Q99624 504 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 SARS2Q9NP81 518 aaKnown RBP11.79□□□□□ -0.52
BRCA1-225ENST00000586385 OGFRQ9NZT2 677 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 TP53TG5Q9Y2B4 290 aa11.79□□□□□ -0.52
BRCA1-225ENST00000586385 A0A0J9YYE9 177 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 PRR19A6NJB7 356 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 FADS2P1A8MWK0 482 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.521e-8■■■□□ 17.6
BRCA1-225ENST00000586385 TRBC1P01850 177 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 FURINP09958 794 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF28P17035 718 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 PCK1P35558 622 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 STAT5AP42229 794 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 CD97P48960 835 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF135P52742 658 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 NFATC2Q13469 925 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 LRP8Q14114 963 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 RALGPS1Q5JS13 557 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 TMCO3Q6UWJ1 677 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 ZNF571Q7Z3V5 609 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 GALNT13Q8IUC8 556 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 NCSTNQ92542 709 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 AHCYL2Q96HN2 611 aaKnown RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 TBC1D10AQ9BXI6 508 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 KCNK6Q9Y257 313 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 KCNMB2Q9Y691 235 aa11.78□□□□□ -0.52
BRCA1-225ENST00000586385 SPTAN1Q13813 2472 aaKnown RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 SPENQ96T58 3664 aaKnown RBP11.78□□□□□ -0.52
BRCA1-225ENST00000586385 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 H3BRJ5 948 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 MTSS1O43312 755 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 RNF8O76064 485 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 PDGFAP04085 211 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 NTRK1P04629 796 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 TPM2P07951 284 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 RARAP10276 462 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 IL4RP24394 825 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 GFERP55789 205 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms