RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DDX50Q9BQ39 737 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 CADM1Q9BY67 442 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 SEMA6AQ9H2E6 1030 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 ZFYVE1Q9HBF4 777 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 EGFL7Q9UHF1 273 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 INSL6Q9Y581 213 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 TDRD15B5MCY1 1934 aaKnown RBP10.25□□□□□ -0.77
RFFL-212ENST00000584655 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
RFFL-212ENST00000584655 DNAJA2O60884 412 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 SIN3BO75182 1162 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 TCEA3O75764 348 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 IGLV3-25P01717 112 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 GJA8P48165 433 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 NEK2P51955 445 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 DSG1Q02413 1049 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 ITIH4Q14624 930 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 C11orf96Q7Z7L8 435 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MMAAQ8IVH4 418 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 VPS33AQ96AX1 596 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PPWD1Q96BP3 646 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 MTBPQ96DY7 904 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PGAP3Q96FM1 320 aaPredicted RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 RPP25Q9BUL9 199 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 CLPBQ9H078 707 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 IKZF3Q9UKT9 509 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PABPN1LA6NDY0 278 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 ALADP13716 330 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 LPOP22079 712 aaPredicted RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 ETV3P41162 512 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PREPP48147 710 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 BNIP1Q12981 228 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 GPM6BQ13491 265 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 OR4D1Q15615 310 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MUM1Q2TAK8 710 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PARP15Q460N3 678 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 HSF5Q4G112 596 aaPredicted RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 ZNF549Q6P9A3 640 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 SERPINA9Q86WD7 417 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 CHPFQ8IZ52 775 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 CNPY4Q8N129 248 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 UTP4Q969X6 686 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 MYO19Q96H55 970 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 TDRD1Q9BXT4 1180 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 CRTAMO95727 393 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PEX11BO96011 259 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 GBAP04062 536 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MLNP12872 115 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 RPL10P27635 214 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 HNF1BP35680 557 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MAGEA3P43357 314 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PSEN1P49768 467 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 UGP2Q16851 508 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 LRRC66Q68CR7 880 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PAOXQ6QHF9 649 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 POTEHQ6S545 545 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MAVSQ7Z434 540 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 ITIH5Q86UX2 942 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 SCG3Q8WXD2 468 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 JPH3Q8WXH2 748 aaPredicted RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 CDRT15Q96T59 188 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 EMILIN2Q9BXX0 1053 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 ADGRE3Q9BY15 652 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 PHACTR1Q9C0D0 580 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 MRPL46Q9H2W6 279 aaKnown RBP10.24□□□□□ -0.77
RFFL-212ENST00000584655 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 VPS4AQ9UN37 437 aa10.24□□□□□ -0.77
RFFL-212ENST00000584655 NPIPB15A6NHN6 443 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 LINC01565O15544 149 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 PEX1O43933 1283 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ANP32DO95626 131 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ATXN1LP0C7T5 689 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 GM2AP17900 193 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 HMGCS1Q01581 520 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 GRIN2CQ14957 1233 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 PLEKHG6Q3KR16 790 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ANGPTL8Q6UXH0 198 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 FRMD7Q6ZUT3 714 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 DEFB119Q8N690 84 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 DHRS4Q9BTZ2 278 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 FRMD8Q9BZ67 464 aaPredicted RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 PCDHAC1Q9H158 963 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 PRSS21Q9Y6M0 314 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 DOCK8Q8NF50 2099 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 AKAP10O43572 662 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 CIB2O75838 187 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 S1PR4O95977 384 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 NNMTP40261 264 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 MAGEA11P43364 429 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 ARCN1P48444 511 aaKnown RBP10.23□□□□□ -0.77
RFFL-212ENST00000584655 NDST2P52849 883 aa10.23□□□□□ -0.77
RFFL-212ENST00000584655 TAF11Q15544 211 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms