RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 RGSL1A5PLK6 1076 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 F5H423 210 aaPredicted RBP20.31■□□□□ 0.84
SS18-224ENST00000584083 IVLP07476 585 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 RTP5Q14D33 572 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 NOMO1Q15155 1222 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 MARK2Q7KZI7 788 aaKnown RBP20.31■□□□□ 0.84
SS18-224ENST00000584083 SYCE1Q8N0S2 351 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 GPR156Q8NFN8 814 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 OR6C4Q8NGE1 309 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 ACTL9Q8TC94 416 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 GPBAR1Q8TDU6 330 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 ALG3Q92685 438 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 CCDC74AQ96AQ1 378 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 FERMT1Q9BQL6 677 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 HERPUD2Q9BSE4 406 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 TRHDEQ9UKU6 1024 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 RAXQ9Y2V3 346 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 ZNF711Q9Y462 761 aa20.31■□□□□ 0.84
SS18-224ENST00000584083 ZFC3H1O60293 1989 aaKnown RBP20.31■□□□□ 0.84
SS18-224ENST00000584083 FREM2Q5SZK8 3169 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 ASPMQ8IZT6 3477 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 A0A0U1RQJ8 604 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 PTMAP06454 111 aaKnown RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 RBL1P28749 1068 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 PTPN7P35236 360 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 ADCY8P40145 1251 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 WNT3AP56704 352 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 OTUD4Q01804 1114 aaKnown RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 ALS2CLQ60I27 953 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 OGFOD3Q6PK18 319 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 RBM44Q6ZP01 1051 aaKnown RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 UBL4BQ8N7F7 174 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 WDR48Q8TAF3 677 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 COX14Q96I36 57 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 OR2M4Q96R27 311 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 WDR24Q96S15 920 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 SRPK1Q96SB4 655 aaKnown RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 CDH19Q9H159 772 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 C10orf88Q9H8K7 445 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 RSPH14Q9UHP6 348 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 URB1O60287 2271 aaKnown RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 UNC13CQ8NB66 2214 aa20.3■□□□□ 0.84
SS18-224ENST00000584083 ANKRD11Q6UB99 2663 aaPredicted RBP20.3■□□□□ 0.84
SS18-224ENST00000584083 NOBOXO60393 691 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 USP12O75317 370 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 TJP3O95049 919 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 PYGMP11217 842 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 AK4P27144 223 aaPredicted RBP20.29■□□□□ 0.84
SS18-224ENST00000584083 GSDMDP57764 484 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 EIF3EP60228 445 aaKnown RBP20.29■□□□□ 0.84
SS18-224ENST00000584083 SPIDRQ14159 915 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 ISXQ2M1V0 245 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 C14orf28Q4W4Y0 310 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 HENMT1Q5T8I9 393 aaKnown RBP20.29■□□□□ 0.84
SS18-224ENST00000584083 AADACL2Q6P093 401 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 SLC30A9Q6PML9 568 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 KDELC1Q6UW63 502 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 NRROSQ86YC3 692 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 SFTPA2Q8IWL1 248 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 EID2BQ96D98 161 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 FCRL5Q96RD9 977 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 FAM118BQ9BPY3 351 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 SPATA16Q9BXB7 569 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 RAD18Q9NS91 495 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 SPATS2LQ9NUQ6 558 aaKnown RBP20.29■□□□□ 0.84
SS18-224ENST00000584083 TAAR2Q9P1P5 351 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 RABGEF1Q9UJ41 708 aa20.29■□□□□ 0.84
SS18-224ENST00000584083 FADS2P1A8MWK0 482 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 CASC3O15234 703 aaKnown RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 TCEA3O75764 348 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 FTCDO95954 541 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 ATP1A1P05023 1023 aaKnown RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 GLB1P16278 677 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 CTBSQ01459 385 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 DARS2Q6PI48 645 aaKnown RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 TMC3Q7Z5M5 1100 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 GALNT13Q8IUC8 556 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 CDKL3Q8IVW4 592 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 SLC25A41Q8N5S1 370 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 Q8N9G6 341 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 IPMKQ8NFU5 416 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 ZDHHC1Q8WTX9 485 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 SCARF2Q96GP6 870 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 OXNAD1Q96HP4 312 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 ZNHIT2Q9UHR6 403 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 CNOT6Q9ULM6 557 aaKnown RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 PACSIN2Q9UNF0 486 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 SPO11Q9Y5K1 396 aa20.28■□□□□ 0.84
SS18-224ENST00000584083 COL27A1Q8IZC6 1860 aaPredicted RBP20.28■□□□□ 0.84
SS18-224ENST00000584083 KIF26BQ2KJY2 2108 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 ZZEF1O43149 2961 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 LOC285095A0A1B0GVY8 99 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 MIF4GDA9UHW6 222 aaKnown RBP20.27■□□□□ 0.84
SS18-224ENST00000584083 BRINP1O60477 761 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 STK10O94804 968 aaKnown RBP20.27■□□□□ 0.84
SS18-224ENST00000584083 EPOP01588 193 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 FGF1P05230 155 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 RBP3P10745 1247 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 CCL7P80098 99 aa20.27■□□□□ 0.84
SS18-224ENST00000584083 BIRC2Q13490 618 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms