RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 CST6Q15828 149 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 LRIG3Q6UXM1 1119 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ERN2Q76MJ5 926 aaKnown RBP12.14□□□□□ -0.47
TSEN54-210ENST00000583634 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
TSEN54-210ENST00000583634 CROCCP2Q86T23 111 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 RGL4Q8IZJ4 473 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 IQCKQ8N0W5 287 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
TSEN54-210ENST00000583634 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ARRDC3Q96B67 414 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ZNF669Q96BR6 464 aaPredicted RBP12.14□□□□□ -0.47
TSEN54-210ENST00000583634 PKNOX2Q96KN3 472 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ACBD3Q9H3P7 528 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ZFYVE1Q9HBF4 777 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 ZNF711Q9Y462 761 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 SPO11Q9Y5K1 396 aa12.14□□□□□ -0.47
TSEN54-210ENST00000583634 C1orf232A0A0U1RR37 186 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 TRIM16O95361 564 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 DNTTP04053 509 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CAPNS1P04632 268 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PRKCGP05129 697 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 IVLP07476 585 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ALPIP09923 528 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PSMA3P25788 255 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 VIPR1P32241 457 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 HADHAP40939 763 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 COPAP53621 1224 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 IFFO1Q0D2I5 559 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ARHGEF7Q14155 803 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 LONRF1Q17RB8 773 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 KLHL38Q2WGJ6 581 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PDPK2PQ6A1A2 396 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 KIAA0930Q6ICG6 404 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ESRP1Q6NXG1 681 aaKnown RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CRTC1Q6UUV9 634 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CES3Q6UWW8 571 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 DPPA4Q7L190 304 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RAB44Q7Z6P3 723 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 TMPRSS6Q8IU80 811 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RAVER1Q8IY67 606 aaKnown RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 TTC30BQ8N4P2 665 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PNPLA1Q8N8W4 532 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 FBF1Q8TES7 1133 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CDKL2Q92772 493 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 MFSD3Q96ES6 412 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 FCRL3Q96P31 734 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RUFY1Q96T51 708 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 CYTH2Q99418 400 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ROPN1BQ9BZX4 212 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ROPN1Q9HAT0 212 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RAD18Q9NS91 495 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 DNAAF2Q9NVR5 837 aaKnown RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
TSEN54-210ENST00000583634 MOCS1Q9NZB8 636 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 B4GALT6Q9UBX8 382 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PLAAQ9Y263 795 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 ARL5AQ9Y689 179 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 WDFY3Q8IZQ1 3526 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 DMXL2Q8TDJ6 3036 aa12.13□□□□□ -0.47
TSEN54-210ENST00000583634 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ZCWPW2A0A1B0GU75 182 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 TCRBV9S1A1TA0A576 114 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 NPIPB15A6NHN6 443 aaPredicted RBP12.12□□□□□ -0.47
TSEN54-210ENST00000583634 PSMD11O00231 422 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 MAP2K7O14733 419 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 MID1O15344 667 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 SLC7A4O43246 635 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 NDUFS2O75306 463 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ZNF217O75362 1048 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 TCEA3O75764 348 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 CLDN7O95471 211 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 SYPP08247 313 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ADRB3P13945 408 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
TSEN54-210ENST00000583634 PRAMEP78395 509 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ACVR1Q04771 509 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 MGAT5Q09328 741 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 CNTN1Q12860 1018 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 NAB1Q13506 487 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 TRIP6Q15654 476 aaKnown RBP12.12□□□□□ -0.47
TSEN54-210ENST00000583634 CNGA3Q16281 694 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 CDKN3Q16667 212 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ZNF423Q2M1K9 1284 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
TSEN54-210ENST00000583634 ZDHHC20Q5W0Z9 365 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 C19orf48Q6RUI8 117 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 KIAA1324Q6UXG2 1013 aaKnown RBP12.12□□□□□ -0.47
TSEN54-210ENST00000583634 LYSMD3Q7Z3D4 306 aa12.12□□□□□ -0.47
TSEN54-210ENST00000583634 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms