RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 EFHC1Q5JVL4 640 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 BRMS1LQ5PSV4 323 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 TAF3Q5VWG9 929 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 ZFAND4Q86XD8 727 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 LURAP1LQ8IV03 231 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 FAM71AQ8IYT1 594 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 PYROXD2Q8N2H3 581 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 PCDH20Q8N6Y1 951 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 PLA2G15Q8NCC3 412 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 BVESQ8NE79 360 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 EXOC2Q96KP1 924 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 KLHL32Q96NJ5 620 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 DNAJC7Q99615 494 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 WRAP53Q9BUR4 548 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 NAA15Q9BXJ9 866 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 WDCPQ9H6R7 721 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 MRPL40Q9NQ50 206 aaKnown RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 HECAQ9UBI9 543 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 LHX3Q9UBR4 397 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 PFDN2Q9UHV9 154 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 DNAI1Q9UI46 699 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 EMC9Q9Y3B6 208 aa7.94□□□□□ -1.14
PPP4R1-225ENST00000583438 SHANK1Q9Y566 2161 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 CCDC187A0A096LP49 1063 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 GOLGA8SH3BPF8 625 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 TPP1O14773 563 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 EPHB6O15197 1021 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 SUV39H1O43463 412 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 FUCA1P04066 466 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 MMEP08473 750 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ITGA2BP08514 1039 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ALPPL2P10696 532 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 KLK7P49862 253 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 DUSP3P51452 185 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 DNA2P51530 1060 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 UCNP55089 124 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 HDAC4P56524 1084 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 NOMO3P69849 1222 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 KRT83P78385 493 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 DEUP1Q05D60 604 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 RALGDSQ12967 914 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 PTP4A2Q12974 167 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 PAK1Q13153 545 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 IKZF1Q13422 519 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 C16orf72Q14CZ0 275 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 KLHL40Q2TBA0 621 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 SLC25A52Q3SY17 297 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 HSP90AA4PQ58FG1 418 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ZNF805Q5CZA5 627 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 COLEC12Q5KU26 742 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 FAM102AQ5T9C2 384 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 BROXQ5VW32 411 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 MACC1Q6ZN28 852 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ZNF227Q86WZ6 799 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 LSMEM2Q8N112 164 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 WDR36Q8NI36 951 aaKnown RBP7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 GPT2Q8TD30 523 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 MRFAP1L1Q96HT8 127 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 C1orf74Q96LT6 269 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 CCNL2Q96S94 520 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 TRIM62Q9BVG3 475 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ABCG4Q9H172 646 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 SYNDIG1Q9H7V2 258 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 USP29Q9HBJ7 922 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 EPB41L5Q9HCM4 733 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 FGF22Q9HCT0 170 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 PCMTD2Q9NV79 361 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 SLC12A6Q9UHW9 1150 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 DNAJC12Q9UKB3 198 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 ACSL6Q9UKU0 697 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 PADI4Q9UM07 663 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 DAAM1Q9Y4D1 1078 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 OR1A2Q9Y585 309 aa7.93□□□□□ -1.14
PPP4R1-225ENST00000583438 NEMP2A6NFY4 417 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 TMEM202A6NGA9 273 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 KRIT1O00522 736 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 FPGTO14772 594 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 PLD2O14939 933 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 TSPAN6O43657 245 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 BUB1BO60566 1050 aaPredicted RBP7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 TCEA3O75764 348 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 TMCC1O94876 653 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 SMC2O95347 1197 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 RPLP0P05388 317 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 GSNP06396 782 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 CCL4P13236 92 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 CYP11B1P15538 503 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 RBMS1P29558 406 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 EGR3Q06889 387 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 ZFP36L1Q07352 338 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 LRP8Q14114 963 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 PTPRRQ15256 657 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 CDO1Q16878 200 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 CCDC14Q49A88 953 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 HIST2H2BCQ6DN03 193 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 RAB11FIP2Q7L804 512 aa7.92□□□□□ -1.14
PPP4R1-225ENST00000583438 TP53INP2Q8IXH6 220 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms