RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OR6C3Q9NZP0 311 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 DBF4Q9UBU7 674 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 FBXO40Q9UH90 709 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 FMN2Q9NZ56 1722 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 NPHP4O75161 1426 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 VPS37CA5D8V6 355 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 GOLGA6L4A6NEF3 574 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ATP8B1O43520 1251 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 RNASEH2AO75792 299 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 KRT38O76015 456 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 METTL18O95568 372 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 PMS2P2O95744 297 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 PAK4O96013 591 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 IGHV4-30-4P0DP06 118 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 HSD3B1P14060 373 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 U2AF2P26368 475 aaKnown RBP eCLIP4.13□□□□□ -1.751e-6■■■■□ 25.1
SMCHD1-208ENST00000583344 GJC1P36383 396 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 GLIPR1P48060 266 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 EVCP57679 992 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 GSDMDP57764 484 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ARHGAP8P85298 464 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 SLC18A2Q05940 514 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 TBX2Q13207 712 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 G3BP1Q13283 466 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 THOC5Q13769 683 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 KCTD2Q14681 263 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 RBBP5Q15291 538 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CALCRLQ16602 461 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 TPD52L1Q16890 204 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CEP85LQ5SZL2 805 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 UNQ6126/PRO20091Q6UXV3 157 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 RSRC2Q7L4I2 434 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 LUZP1Q86V48 1076 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 MON1AQ86VX9 555 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CCDC105Q8IYK2 499 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 NECAB1Q8N987 351 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CCDC89Q8N998 374 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 SPC24Q8NBT2 197 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 SETD9Q8NE22 299 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CCDC112Q8NEF3 446 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ZNF397Q8NF99 534 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 LINS1Q8NG48 757 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 KIF18AQ8NI77 898 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 WBP2Q969T9 261 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 LTV1Q96GA3 475 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ERO1AQ96HE7 468 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 TBATAQ96M53 351 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 UHRF2Q96PU4 802 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 NEK1Q96PY6 1258 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 RMDN3Q96TC7 470 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 EIF2AK1Q9BQI3 630 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 BPIFA3Q9BQP9 254 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ISCA1Q9BUE6 129 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 CTDSP1Q9GZU7 261 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ATP8A2Q9NTI2 1148 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 NRBP1Q9UHY1 535 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ADAM18Q9Y3Q7 739 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 ADCY9O60503 1353 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 RFX7Q2KHR2 1363 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 MED23Q9ULK4 1368 aa4.13□□□□□ -1.75
SMCHD1-208ENST00000583344 OVOS2A0A0G2JMS6 1433 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ANKARQ7Z5J8 1434 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 E7EVH7 732 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PFKFB2O60825 505 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 KDM4BO94953 1096 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 NLRP5P59047 1200 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ICA1Q05084 483 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 LRMPQ12912 555 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PTPN14Q15678 1187 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 CAMK4Q16566 473 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 FBXO43Q4G163 708 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PLEKHO1Q53GL0 409 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 HYIQ5T013 277 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ADALQ6DHV7 355 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 CCDC129Q6ZRS4 1044 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 TUBA1AQ71U36 451 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ANKRD18AQ8IVF6 992 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ZNF441Q8N8Z8 693 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 IL17RCQ8NAC3 791 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 MCPH1Q8NEM0 835 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ARRDC2Q8TBH0 407 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 CSGALNACT1Q8TDX6 532 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 GTF3C6Q969F1 213 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 MTBPQ96DY7 904 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ZNF274Q96GC6 653 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ZNF396Q96N95 335 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 NEUROD6Q96NK8 337 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PGLYRP2Q96PD5 576 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 OR1F2PQ96R84 312 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 CSF3RQ99062 836 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 MMP28Q9H239 520 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 UBTD1Q9HAC8 227 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 ANO10Q9NW15 660 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 RRN3Q9NYV6 651 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PGAP2Q9UHJ9 254 aa4.12□□□□□ -1.75
SMCHD1-208ENST00000583344 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms