RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ATP13A3Q9H7F0 1226 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 PIDD1Q9HB75 910 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ZMYM5Q9UJ78 669 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 TMEM265A0A087WTH1 108 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ZNF197O14709 1029 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 VPS26AO75436 327 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 IMPDH1P20839 514 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 FMO4P31512 558 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 PGM1P36871 562 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 CCR2P41597 374 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 COPAP53621 1224 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 RAD51Q06609 339 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ZRSR2Q15696 482 aaKnown RBP22.57■■□□□ 1.2
CCDC47-204ENST00000582252 NKAPQ8N5F7 415 aaKnown RBP22.57■■□□□ 1.2
CCDC47-204ENST00000582252 VN1R2Q8NFZ6 395 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 SMG7Q92540 1137 aaKnown RBP22.57■■□□□ 1.2
CCDC47-204ENST00000582252 L3HYPDHQ96EM0 354 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ASB2Q96Q27 587 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 DERL2Q9GZP9 239 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 GTSE1Q9NYZ3 720 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 LMCD1Q9NZU5 365 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 SLC30A1Q9Y6M5 507 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 CCDC189A1A4V9 331 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 GRID2O43424 1007 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 MT-CO1P00395 513 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 ADSLP30566 484 aaPredicted RBP22.56■■□□□ 1.2
CCDC47-204ENST00000582252 SATB1Q01826 763 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 CACNG1Q06432 222 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 SH2D4BQ5SQS7 431 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 GRASPQ7Z6J2 395 aaPredicted RBP22.56■■□□□ 1.2
CCDC47-204ENST00000582252 CMTM8Q8IZV2 173 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 PNPLA1Q8N8W4 532 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 RBM15BQ8NDT2 890 aaKnown RBP22.56■■□□□ 1.2
CCDC47-204ENST00000582252 MAPK15Q8TD08 544 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 AGAP11Q8TF27 550 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 TTC1Q99614 292 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 CYP4F12Q9HCS2 524 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 PLK2Q9NYY3 685 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 IL17CQ9P0M4 197 aa22.56■■□□□ 1.2
CCDC47-204ENST00000582252 NEMP2A6NFY4 417 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 E9PBE3 544 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 KLHL41O60662 606 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 PKMP14618 531 aaKnown RBP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 HMGCLP35914 325 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 PTGER3P43115 390 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 ADARP55265 1226 aaKnown RBP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 SNRPD1P62314 119 aaKnown RBP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 TIAL1Q01085 375 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 C6orf163Q5TEZ5 329 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 UGT3A1Q6NUS8 523 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 TMEM184AQ6ZMB5 413 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 CERS6Q6ZMG9 384 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 FRMD7Q6ZUT3 714 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 PIH1D2Q8WWB5 315 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 NUF2Q9BZD4 464 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 IGFLR1Q9H665 355 aa22.55■■□□□ 1.2
CCDC47-204ENST00000582252 EVLQ9UI08 416 aaPredicted RBP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 NUP210Q8TEM1 1887 aaPredicted RBP22.55■■□□□ 1.2
CCDC47-204ENST00000582252 BRWD1Q9NSI6 2320 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 K7ERQ8 282 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 HTRA2O43464 458 aaPredicted RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 ZBTB14O43829 449 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 MOSPD3O75425 235 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 SERPINA4P29622 427 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 CD70P32970 193 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 CCR10P46092 362 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 NAA20P61599 178 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PTPRNQ16849 979 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TCEAL5Q5H9L2 206 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PRSS36Q5K4E3 855 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TMC5Q6UXY8 1006 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 RYBPQ8N488 228 aaPredicted RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 KDM1BQ8NB78 822 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 STAG3L4Q8TBR4 150 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 ISG20Q96AZ6 181 aaKnown RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TCEAL4Q96EI5 215 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PHF21BQ96EK2 531 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 OR52B2Q96RD2 323 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 CD248Q9HCU0 757 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 SLC25A13Q9UJS0 675 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 SMAD6O43541 496 aaKnown RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 DCXO43602 365 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 ESR1P03372 595 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PRSS56P0CW18 603 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 RAP1GDS1P52306 607 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 HYAL1Q12794 435 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PEX6Q13608 980 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TEAD2Q15562 447 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 SLC5A9Q2M3M2 681 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PITRM1Q5JRX3 1037 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 PSAPL1Q6NUJ1 521 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 CAMK1DQ8IU85 385 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 C12orf76Q8N812 135 aaPredicted RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 OR2AP1Q8NGE2 309 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 MOCOSQ96EN8 888 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 BPIFA1Q9NP55 256 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TRMT6Q9UJA5 497 aaKnown RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 TMCO1Q9UM00 188 aa22.54■■□□□ 1.2
CCDC47-204ENST00000582252 OAS3Q9Y6K5 1087 aaKnown RBP22.54■■□□□ 1.2
CCDC47-204ENST00000582252 A0A0J9YYE9 177 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms