RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 PLXDC1Q8IUK5 500 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 RHOT1Q8IXI2 618 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 CBARPQ8N350 705 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 C9orf72Q96LT7 481 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 LHX9Q9NQ69 397 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 TRBV23OR9-2A0A075B6M9 112 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 ARGFXA6NJG6 315 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RASA4BC9J798 803 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 TRAFD1O14545 582 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RASA4O43374 803 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 GNA14O95837 355 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RGRP47804 291 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 ITGA1P56199 1179 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 STX17P56962 302 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 CNGA3Q16281 694 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 ZXDCQ2QGD7 858 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 PYCR3Q53H96 274 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RAB6CQ53S08 254 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 SRLQ86TD4 932 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 UMODL1-AS1Q8N2C9 162 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 TMEM35BQ8NCS4 154 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RNF31Q96EP0 1072 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 POM121Q96HA1 1249 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RANBP9Q96S59 729 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 BARD1Q99728 777 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 MFRPQ9BY79 579 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 MAGEB5Q9BZ81 275 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RAB6CQ9H0N0 254 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 STN1Q9H668 368 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 RUBCNLQ9H714 662 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 ASF1BQ9NVP2 202 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 B4GALT6Q9UBX8 382 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 LNPEPQ9UIQ6 1025 aa13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSNK1D-211ENST00000579316 LILRA5A6NI73 299 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 SPAG6O75602 509 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 PTPN4P29074 926 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 CLCN1P35523 988 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 GFERP55789 205 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 SH3BP2P78314 561 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 ATP11AP98196 1134 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 NFATC2Q13469 925 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 IL10RAQ13651 578 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 STX1AQ16623 288 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 RASGRP3Q8IV61 690 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 IQCKQ8N0W5 287 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 OR6C1Q96RD1 312 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 APEX2Q9UBZ4 518 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 PKDREJQ9NTG1 2253 aa13.73□□□□□ -0.21
CSNK1D-211ENST00000579316 ANKHD1Q8IWZ3 2542 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 SVILO95425 2214 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 NIPBLQ6KC79 2804 aaeCLIP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 SSU72P8A0A1W2PR75 194 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 PRAMEF11O60813 436 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 SOD1P00441 154 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 LPOP22079 712 aaPredicted RBP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 ITGA3P26006 1051 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 ETV3P41162 512 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 MAPK9P45984 424 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 DPTQ07507 201 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 ZRSR2Q15696 482 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 SP5Q6BEB4 398 aaPredicted RBP13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 RAET1GQ6H3X3 334 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 IYDQ6PHW0 289 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 ADAMTSL4Q6UY14 1074 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 SLC9B2Q86UD5 537 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 CCDC185Q8N715 623 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 FDCSPQ8NFU4 85 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 NTAN1Q96AB6 310 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
CSNK1D-211ENST00000579316 A8MX80 341 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 PSMD11O00231 422 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 EPHB2P29323 1055 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 VIPR1P32241 457 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 PTGIRP43119 386 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms