RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 VPS18Q9P253 973 aa12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 SAE1Q9UBE0 346 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-206ENST00000577578 GOLGA6CA6NDK9 693 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GOLGA6BA6NDN3 693 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 SOWAHDA6NJG2 315 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 B4DGG1 531 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 MTSS1O43312 755 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 FGF1P05230 155 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GOLGA6DP0CG33 693 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 TNNT1P13805 278 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 CCKBRP32239 447 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 ADCY8P40145 1251 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GNPDA1P46926 289 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 DCDC1P59894 354 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 CTBSQ01459 385 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 PEX6Q13608 980 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 LRP8Q14114 963 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GALNT3Q14435 633 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 PYCR3Q53H96 274 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 BBS12Q6ZW61 710 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 SPRED1Q7Z699 444 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 PDZD3Q86UT5 571 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GAS2L3Q86XJ1 694 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 CCNJLQ8IV13 435 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 TFB1MQ8WVM0 346 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 KRT35Q92764 455 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 P3H4Q92791 437 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 RBM41Q96IZ5 413 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 OR2M4Q96R27 311 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GFM1Q96RP9 751 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 LRRN3Q9H3W5 708 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 FAM83DQ9H4H8 585 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GLOD4Q9HC38 313 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 GOLGA6AQ9NYA3 693 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 TAAR2Q9P1P5 351 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 MOSPD1Q9UJG1 213 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 SATB2Q9UPW6 733 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 RNF215Q9Y6U7 377 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 KALRNO60229 2985 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 ATMQ13315 3056 aa12.37□□□□□ -0.43
CSNK1D-206ENST00000577578 FASNP49327 2511 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 CDRT15L2A8MXV6 281 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 TMX2-CTNND1H3BSU7 103 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 DNAJC6O75061 913 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 NDST3O95803 873 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 EPOP01588 193 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 RPLP0P05388 317 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ITPKBP27987 946 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 CD68P34810 354 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ABCG1P45844 678 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 PCBP4P57723 403 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 COPS2P61201 443 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 CCL7P80098 99 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 CDK18Q07002 472 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ZFP36L1Q07352 338 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 EIF3IQ13347 325 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 C3orf38Q5JPI3 329 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 RAD9BQ6WBX8 426 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 TMC3Q7Z5M5 1100 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 B3GNT8Q7Z7M8 397 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 TRIM74Q86UV6 250 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 NAGSQ8N159 534 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ZNF248Q8NDW4 579 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 SPATA22Q8NHS9 363 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 WDR36Q8NI36 951 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ZDHHC1Q8WTX9 485 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 VAT1Q99536 393 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 ZFYVE1Q9HBF4 777 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 THSD1Q9NS62 852 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 TMEM98Q9Y2Y6 226 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 PCDHA3Q9Y5H8 950 aa12.36□□□□□ -0.43
CSNK1D-206ENST00000577578 LOC285095A0A1B0GVY8 99 aa12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 HACD1B0YJ81 288 aa12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 APOC4-APOC2K7ER74 178 aa12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 PJA2O43164 708 aa12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 IPO7O95373 1038 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 ECEL1O95672 775 aa12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 MT-CYBP00156 380 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-206ENST00000577578 APOC2P02655 101 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms