RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 TLR10Q9BXR5 811 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 FRMD8P1Q9BZ68 369 aaPredicted RBP20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 TMEM168Q9H0V1 697 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 TRABDQ9H4I3 376 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 NCKIPSDQ9NZQ3 722 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 SUFUQ9UMX1 484 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 TMEM98Q9Y2Y6 226 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 NEUROG3Q9Y4Z2 214 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 LIASO43766 372 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 ASMTLO95671 621 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 CDK4P11802 303 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 GNPDA1P46926 289 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 POLD2P49005 469 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 GDF10P55107 478 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 NR0B2Q15466 257 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 LVRNQ6Q4G3 990 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 GLT6D1Q7Z4J2 308 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 GPR26Q8NDV2 337 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 APOL2Q9BQE5 337 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 BOCQ9BWV1 1114 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 CDH19Q9H159 772 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 BPIFA1Q9NP55 256 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 HACD3Q9P035 362 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 SLC17A4Q9Y2C5 497 aa20.59■□□□□ 0.89
HCFC1R1-208ENST00000575214 LY6G6EA0A0G2JKS1 128 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 FADS2P1A8MWK0 482 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 ZSCAN12O43309 604 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 DCDC1P59894 354 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 OLIG2Q13516 323 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 MARK2Q7KZI7 788 aaKnown RBP20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 GALNT15Q8N3T1 639 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 PTCD2Q8WV60 388 aaKnown RBP20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 C1orf54Q8WWF1 131 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 LRRC45Q96CN5 670 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 COX14Q96I36 57 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 PDLIM2Q96JY6 352 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 ZSCAN5AQ9BUG6 496 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 SIRPGQ9P1W8 387 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 GPR34Q9UPC5 381 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 U3KQA8 63 aa20.58■□□□□ 0.88
HCFC1R1-208ENST00000575214 LRP4O75096 1905 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 CPED1A4D0V7 1026 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 FUCA1P04066 466 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 IVLP07476 585 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 BPIP17213 487 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 ADRA1AP35348 466 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 HMGCLP35914 325 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 RPIAP49247 311 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 SNX1Q13596 522 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 PARP6Q2NL67 630 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 ZNF569Q5MCW4 686 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 TMPRSS7Q7RTY8 843 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 SLC35F3Q8IY50 421 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 TTC30BQ8N4P2 665 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 CCL4L1Q8NHW4 92 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 IFI44Q8TCB0 444 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 TBL1YQ9BQ87 522 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 NFKBIL1Q9UBC1 381 aaPredicted RBP20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 GULP1Q9UBP9 304 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 CNOT6Q9ULM6 557 aaKnown RBP20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 ZNF148Q9UQR1 794 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 MSRB2Q9Y3D2 182 aa20.57■□□□□ 0.88
HCFC1R1-208ENST00000575214 SPEGQ15772 3267 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 CEP104O60308 925 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 IFNB1P01574 187 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 FGGP02679 453 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 ATP1A1P05023 1023 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 STIP1P31948 543 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 CXCR5P32302 372 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 CLDN6P56747 220 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 ILF3Q12906 894 aaKnown RBP eCLIP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 OASLQ15646 514 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 SMAD1Q15797 465 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 P3H1Q32P28 736 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 GUSBP11Q6P575 273 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 RANBP10Q6VN20 620 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 REXO1L1PQ8IX06 675 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 TAB3Q8N5C8 712 aaPredicted RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 TRAM1L1Q8N609 369 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 ARL10Q8N8L6 244 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 KYQ8NBH2 561 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 FAM46DQ8NEK8 389 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 MAIP1Q8WWC4 291 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 GSDMCQ9BYG8 508 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 TRNAU1APQ9NX07 287 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 TRMT1Q9NXH9 659 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 GPSM3Q9Y4H4 160 aa20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 OAS3Q9Y6K5 1087 aaKnown RBP20.56■□□□□ 0.88
HCFC1R1-208ENST00000575214 BUD23O43709 281 aaKnown RBP20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 USP12O75317 370 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 METTL18O95568 372 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 ACTN2P35609 894 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 E2F1Q01094 437 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 SPARCL1Q14515 664 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 HES3Q5TGS1 186 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 EFL1Q7Z2Z2 1120 aaKnown RBP20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 GALNT13Q8IUC8 556 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 RTP4Q96DX8 246 aa20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 SCARF2Q96GP6 870 aaPredicted RBP20.55■□□□□ 0.88
HCFC1R1-208ENST00000575214 CNTNAP3BQ96NU0 1288 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms