RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RPL6Q02878 288 aaKnown RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 PRKD1Q15139 912 aaPredicted RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 AMHR2Q16671 573 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 LINGO2Q7L985 606 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 PIGKQ92643 395 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 ZNF670Q9BS34 389 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 TMEM165Q9HC07 324 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.08□□□□□ -1.68e-9■■■■■ 30
SMG1-211ENST00000565324 FBXO10Q9UK96 956 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 TARBP1Q13395 1621 aaKnown RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 CCDC88CQ9P219 2028 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 CYP27B1O15528 508 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SLC28A2O43868 658 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 PCDHGA12O60330 932 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 GNAO1P09471 354 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SPARCP09486 303 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SRCP12931 536 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 GRIA1P42261 906 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 TUBP50607 506 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 ERVK-9P63128 1117 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 ADIGQ0VDE8 80 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 EFEMP1Q12805 493 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 USP4Q13107 963 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 LRRC70Q7Z2Q7 622 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 PACRGLQ8N7B6 248 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SGCDQ92629 289 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 TCEAL4Q96EI5 215 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 ZNF347Q96SE7 839 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 NUDT15Q9NV35 164 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 TSPAN16Q9UKR8 245 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 REXO2Q9Y3B8 237 aaKnown RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 DGKBQ9Y6T7 804 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 CCDC88AQ3V6T2 1871 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SIGLEC16A6NMB1 481 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 H6PDO95479 791 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 UGT2B4P06133 528 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 COL6A2P12110 1019 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 KCNA5P22460 613 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 PLK1P53350 603 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 ADAM15Q13444 863 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SMU1Q2TAY7 513 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 MIIPQ5JXC2 388 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 CPTPQ5TA50 214 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 OGFRL1Q5TC84 451 aaPredicted RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 TMEM86AQ8N2M4 240 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 MARCH10Q8NA82 808 aaPredicted RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 PIGXQ8TBF5 258 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SLC38A4Q969I6 547 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 DDX43Q9NXZ2 648 aaKnown RBP5.08□□□□□ -1.6
SMG1-211ENST00000565324 PLK2Q9NYY3 685 aa5.08□□□□□ -1.6
SMG1-211ENST00000565324 SCELO95171 688 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ASLP04424 464 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 TAS2R43P59537 309 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 DCDC1P59894 354 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UBAP2LQ14157 1087 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 EIPR1Q53HC9 387 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 C6orf52Q5T4I8 152 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ZPBP2Q6X784 338 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 CFAP206Q8IYR0 622 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UBR7Q8N806 425 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 OR4A15Q8NGL6 344 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UFD1Q92890 307 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 COL26A1Q96A83 441 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RAD51AP1Q96B01 352 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 NSUN4Q96CB9 384 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 RCN3Q96D15 328 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ZNF668Q96K58 619 aaPredicted RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 KCTD7Q96MP8 289 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ACTR6Q9GZN1 396 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ABCC13Q9NSE7 274 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UNC13BO14795 1591 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 AZIN1O14977 448 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 TBX1O43435 398 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 IFNW1P05000 195 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UROSP10746 265 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RPS9P46781 194 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 PNLIPRP1P54315 467 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RAB5BP61020 215 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 BAATQ14032 418 aaPredicted RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 PABPC1LQ4VXU2 614 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 LLGL2Q6P1M3 1020 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 AMIGO2Q86SJ2 522 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 AMIGO1Q86WK6 493 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 SPERTQ8NA61 448 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 TMEM184CQ9NVA4 438 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 PRR12Q9ULL5 1215 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 MYO5BQ9ULV0 1848 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 SH3D21A4FU49 640 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 NOS2P35228 1153 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 CA9Q16790 459 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RAB12Q6IQ22 244 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 CXorf57Q6NSI4 855 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 KCTD4Q8WVF5 259 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 DNAJC28Q9NX36 388 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 FABP12A6NFH5 140 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 SASH3O75995 380 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 GRM3Q14832 879 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ZNF311Q5JNZ3 666 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 UTS2BQ765I0 119 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms