RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ACAD10Q6JQN1 1059 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 C19orf48Q6RUI8 117 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 RAD9BQ6WBX8 426 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 ACVR1CQ8NER5 493 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 DMBX1Q8NFW5 382 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 OR5R1Q8NH85 324 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 ACOX2Q99424 681 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 PIP5K1AQ99755 562 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 PRKRIP1Q9H875 184 aaPredicted RBP4.67□□□□□ -1.66
UBR1-205ENST00000564540 SLC28A3Q9HAS3 691 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 ABI3Q9P2A4 366 aa4.67□□□□□ -1.66
UBR1-205ENST00000564540 FAM237AA0A1B0GTK4 181 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 AGR2O95994 175 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 FOXM1Q08050 763 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 RBM39Q14498 530 aaKnown RBP4.66□□□□□ -1.66
UBR1-205ENST00000564540 FRG2Q64ET8 278 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 CDC73Q6P1J9 531 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 INO80CQ6PI98 192 aaPredicted RBP4.66□□□□□ -1.66
UBR1-205ENST00000564540 BRAT1Q6PJG6 821 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 TSSK4Q6SA08 328 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 ASB18Q6ZVZ8 466 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 DPPA4Q7L190 304 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 SMC5Q8IY18 1101 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 SRBD1Q8N5C6 995 aaKnown RBP4.66□□□□□ -1.66
UBR1-205ENST00000564540 SLC24A4Q8NFF2 622 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 PIGTQ969N2 578 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 IGSF8Q969P0 613 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 ALG14Q96F25 216 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 PCGF1Q9BSM1 259 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 SYT17Q9BSW7 474 aa4.66□□□□□ -1.66
UBR1-205ENST00000564540 ZNF334Q9HCZ1 680 aaPredicted RBP4.66□□□□□ -1.66
UBR1-205ENST00000564540 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 SPINT2O43291 252 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 NKX2-2O95096 273 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 UBL4AP11441 157 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 KRT10P13645 584 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
UBR1-205ENST00000564540 TAS2R38P59533 333 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 TBX2Q13207 712 aaPredicted RBP4.65□□□□□ -1.67
UBR1-205ENST00000564540 GTF2H2Q13888 395 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 GTF2H2CQ6P1K8 395 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 KCTD8Q6ZWB6 473 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 NRROSQ86YC3 692 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 OR14L1PQ8NHC6 308 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 METTL6Q8TCB7 284 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 APBB2Q92870 758 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 ZNF583Q96ND8 569 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 SCPEP1Q9HB40 452 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 UBN1Q9NPG3 1134 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 PTPRCP08575 1304 aa4.65□□□□□ -1.67
UBR1-205ENST00000564540 NPIPB15A6NHN6 443 aaPredicted RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 EIF3CLB5ME19 914 aaKnown RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 CFC1BP0CG36 223 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 CFC1P0CG37 223 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 ATP1A3P13637 1013 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 ZNF182P17025 639 aaPredicted RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 GLIPR1P48060 266 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 RARSP54136 660 aaKnown RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 PITX1P78337 314 aaPredicted RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 TMEM115Q12893 351 aaPredicted RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 OLIG2Q13516 323 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 FRG1Q14331 258 aaKnown RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 ZNF234Q14588 700 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 DECR1Q16698 335 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 MRGPRG-AS1Q2M3A8 158 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 ZNF852Q6ZMS4 543 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 NFE4Q86UQ8 179 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 EPHX4Q8IUS5 362 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 KLHDC8BQ8IXV7 354 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 SLC38A5Q8WUX1 472 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 RRNAD1Q96FB5 475 aaKnown RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 QRFPRQ96P65 431 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 POLR3CQ9BUI4 534 aaPredicted RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 TAS2R10Q9NYW0 307 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 CNOT8Q9UFF9 292 aaKnown RBP4.64□□□□□ -1.67
UBR1-205ENST00000564540 DLGAP4Q9Y2H0 992 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 KLHL20Q9Y2M5 609 aa4.64□□□□□ -1.67
UBR1-205ENST00000564540 C1orf226A1L170 272 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 WDR1O75083 606 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 PAK4O96013 591 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 CD53P19397 219 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 ANOS1P23352 680 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 TIMP3P35625 211 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 F2RL1P55085 397 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 CASP6P55212 293 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 CLDN20P56880 219 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 GRIK2Q13002 908 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 CDONQ4KMG0 1287 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 PMS2CLQ68D20 193 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 PLA2G4FQ68DD2 849 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 FAM171BQ6P995 826 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 ATF7IPQ6VMQ6 1270 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 GSTA5Q7RTV2 222 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 CACNA2D4Q7Z3S7 1137 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 R3HCC1LQ7Z5L2 792 aaKnown RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 FOXP4Q8IVH2 680 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 METTL27Q8N6F8 245 aaPredicted RBP4.63□□□□□ -1.67
UBR1-205ENST00000564540 TSPYL6Q8N831 410 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 KCNG4Q8TDN1 519 aa4.63□□□□□ -1.67
UBR1-205ENST00000564540 TAAR8Q969N4 342 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms