RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SLC22A3O75751 556 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SEC24AO95486 1093 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 NR2F6P10588 404 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TSHRP16473 764 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SLC26A3P40879 764 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 MNDAP41218 407 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 PPP2R2BQ00005 443 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 LARS2Q15031 903 aaKnown RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 TTC27Q6P3X3 843 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 FAM81AQ8TBF8 368 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ZNF184Q99676 751 aaPredicted RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 DERAQ9Y315 318 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ZBTB22O15209 634 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SCGNO76038 276 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SPAM1P38567 509 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 UBAP2LQ14157 1087 aaKnown RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 PARP15Q460N3 678 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
RPAP1-204ENST00000562303 COX4I2Q96KJ9 171 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 FCRL4Q96PJ5 515 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 GAL3ST4Q96RP7 486 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 GLOD4Q9HC38 313 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 CD84Q9UIB8 345 aa11.22□□□□□ -0.61
RPAP1-204ENST00000562303 HDAC3O15379 428 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 IFNA6P05013 189 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 ARF4P18085 180 aaPredicted RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 ZBTB6Q15916 424 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 IRGCQ6NXR0 463 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 CHST15Q7LFX5 561 aaPredicted RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 NET1Q7Z628 596 aaPredicted RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 STX12Q86Y82 276 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 UNC5BQ8IZJ1 945 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 XAGE5Q8WWM1 108 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 GOLGA2P5Q9HBQ8 144 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 RAI2Q9Y5P3 530 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 LAMP2P13473 410 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 EPHA3P29320 983 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 CAPGP40121 348 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 ACLYP53396 1101 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 CDH13P55290 713 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 NRG1Q02297 640 aaPredicted RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 PCDH1Q08174 1060 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 PIK3R6Q5UE93 754 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 VSTM1Q6UX27 236 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 ARCQ7LC44 396 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 SRFBP1Q8NEF9 429 aaKnown RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 IL31RAQ8NI17 732 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 LNX1Q8TBB1 728 aaPredicted RBP11.21□□□□□ -0.61
RPAP1-204ENST00000562303 ZHX1-C8orf76Q96EF9 292 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 MAML3Q96JK9 1138 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 APOLD1Q96LR9 279 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 SLC38A3Q99624 504 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 PCDHB1Q9Y5F3 818 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 CLUHO75153 1309 aa11.21□□□□□ -0.61
RPAP1-204ENST00000562303 MEIS2O14770 477 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 RAB25P57735 213 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 NOMO3P69849 1222 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 UBXN2BQ14CS0 331 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 RFTN2Q52LD8 501 aaPredicted RBP11.21□□□□□ -0.62
RPAP1-204ENST00000562303 ATXN7L2Q5T6C5 722 aaPredicted RBP11.21□□□□□ -0.62
RPAP1-204ENST00000562303 MSANTD2Q6P1R3 559 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 RHBDF2Q6PJF5 856 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 OR4K2Q8NGD2 314 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 OR5T3Q8NGG3 340 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 TSSK3Q96PN8 268 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 COL1A2P08123 1366 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 SNAP91O60641 907 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 LDOC1O95751 146 aaPredicted RBP11.21□□□□□ -0.62
RPAP1-204ENST00000562303 FMO1Q01740 532 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 PUDPQ08623 228 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 DMPKQ09013 629 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 BST1Q10588 318 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 KCNA10Q16322 511 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 BBS12Q6ZW61 710 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 C10orf107Q8IVU9 208 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 PARP8Q8N3A8 854 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 EXOSC8Q96B26 276 aaKnown RBP11.21□□□□□ -0.62
RPAP1-204ENST00000562303 SPATA9Q9BWV2 254 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 NMUR1Q9HB89 426 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 MCCC2Q9HCC0 563 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 POLMQ9NP87 494 aaPredicted RBP11.21□□□□□ -0.62
RPAP1-204ENST00000562303 ERVK-11Q9UQG0 969 aa11.21□□□□□ -0.62
RPAP1-204ENST00000562303 IRGMA1A4Y4 181 aa11.2□□□□□ -0.62
RPAP1-204ENST00000562303 CCDC162PA2VCL2 907 aa11.2□□□□□ -0.62
RPAP1-204ENST00000562303 PRMT5O14744 637 aaPredicted RBP11.2□□□□□ -0.62
RPAP1-204ENST00000562303 RSL1D1O76021 490 aaKnown RBP11.2□□□□□ -0.62
RPAP1-204ENST00000562303 RAB2AP61019 212 aa11.2□□□□□ -0.62
RPAP1-204ENST00000562303 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
RPAP1-204ENST00000562303 CKAP2Q8WWK9 683 aa11.2□□□□□ -0.62
RPAP1-204ENST00000562303 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms