RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 OR4N2Q8NGD1 307 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 SCFD2Q8WU76 684 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 SLC35F5Q8WV83 523 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 USP6NLQ92738 828 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 ARHGEF2Q92974 986 aaKnown RBP3.86□□□□□ -1.79
HERC1-215ENST00000561436 GTF3C6Q969F1 213 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 EME1Q96AY2 570 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 HEMGNQ9BXL5 484 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 DEFB129Q9H1M3 183 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 CDT1Q9H211 546 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 SMARCAD1Q9H4L7 1026 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 KAT14Q9H8E8 782 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 WDR6Q9NNW5 1121 aaKnown RBP3.86□□□□□ -1.79
HERC1-215ENST00000561436 BPIFA1Q9NP55 256 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 SPAG4Q9NPE6 437 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 MIS18AQ9NYP9 233 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 DLGAP2Q9P1A6 1054 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 GPR34Q9UPC5 381 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 PIAS3Q9Y6X2 628 aa3.86□□□□□ -1.79
HERC1-215ENST00000561436 COL4A5P29400 1685 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 SCN7AQ01118 1682 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 LTBP1Q14766 1721 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 DYTNA2CJ06 578 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 LIPT2A6NK58 231 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 MYO1GB0I1T2 1018 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 HSPB6O14558 160 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 LDLRAD4O15165 306 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 TLX3O43711 291 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 CNOT3O75175 753 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 SYF2O95926 243 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 TFP02787 698 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 KLKB1P03952 638 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 EIF2S1P05198 315 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 CETPP11597 493 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CD58P19256 250 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 EIF2S2P20042 333 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 CDAP32320 146 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 TNFSF8P32971 234 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 AVPR1AP37288 418 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CDH12P55289 794 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 HDAC4P56524 1084 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 RIPK4P57078 832 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 TMEM115Q12893 351 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 CHAF1BQ13112 559 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CUL4AQ13619 759 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 FRG1Q14331 258 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 TCTN1Q2MV58 587 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 RILPL1Q5EBL4 403 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 EPHA10Q5JZY3 1008 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 TSSK4Q6SA08 328 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CYP20A1Q6UW02 462 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 FAM83HQ6ZRV2 1179 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 MRPL10Q7Z7H8 261 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 TEX11Q8IYF3 940 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 ZCCHC9Q8N567 271 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 CCDC89Q8N998 374 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 LPAR1Q92633 364 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 ZBTB9Q96C00 473 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CCDC34Q96HJ3 373 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 GFM1Q96RP9 751 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 LBHD1Q9BQE6 289 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 STRA6Q9BX79 667 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 MAK16Q9BXY0 300 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 ITPAQ9BY32 194 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 PRO3102Q9H379 93 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 FBRSL1Q9HCM7 1045 aaKnown RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 FZD3Q9NPG1 666 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 ASAH2Q9NR71 780 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CWC25Q9NXE8 425 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 MSRB1Q9NZV6 116 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 CTNNAL1Q9UBT7 734 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 PLEKHB1Q9UF11 243 aaPredicted RBP3.85□□□□□ -1.79
HERC1-215ENST00000561436 MTMR6Q9Y217 621 aa3.85□□□□□ -1.79
HERC1-215ENST00000561436 DLEC1Q9Y238 1755 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 ITGB4P16144 1822 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 FAM237BA0A1B0GVD1 139 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 A6NCN8 305 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 CBY3A6NI87 242 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 PRSS47A8MTI9 375 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 PTGES3LE9PB15 166 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 STMND1H3BQB6 276 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 PPEF2O14830 753 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 MDM4O15151 490 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 PTP4A3O75365 173 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 NDUFS3O75489 264 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 GFPT2O94808 682 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TTKP33981 857 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 RGS2P41220 211 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TMPOP42166 694 aaKnown RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 ENTPD1P49961 510 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 TMPRSS3P57727 454 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 UBXN2AP68543 259 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 AIMP1Q12904 312 aaKnown RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 CSTF3Q12996 717 aaKnown RBP3.84□□□□□ -1.79
HERC1-215ENST00000561436 WTAPQ15007 396 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 MEA1Q16626 185 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 C10orf25Q5T742 122 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 FKBP1CQ5VVH2 108 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 FAM205BPQ63HN1 556 aa3.84□□□□□ -1.79
HERC1-215ENST00000561436 PATL1Q86TB9 770 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms