RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	SLC12A2	P55011	1212 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	NR1H2	P55055	460 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	RPP30	P78346	268 aa	Known RBP	4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	GHRHR	Q02643	423 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	MECOM	Q03112	1051 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	TNFAIP1	Q13829	316 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	GPR68	Q15743	365 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	AP5B1	Q2VPB7	878 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	MMEL1	Q495T6	779 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	CDC42EP5	Q6NZY7	148 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	MTFR2	Q6P444	385 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF813	Q6ZN06	617 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF788	Q6ZQV5	615 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYB5R4	Q7L1T6	521 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	LRRC8D	Q7L1W4	858 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	RNF144B	Q7Z419	303 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	GALNT7	Q86SF2	657 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADGRG6	Q86SQ4	1221 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	PRIMA1	Q86XR5	153 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	RFX6	Q8HWS3	928 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	SCN4B	Q8IWT1	228 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADAMTS15	Q8TE58	950 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	UCMA	Q8WVF2	138 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ANKRD49	Q8WVL7	239 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	NCSTN	Q92542	709 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	CUL5	Q93034	780 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	KIF1BP	Q96EK5	621 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	BICD1	Q96G01	975 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	CFAP36	Q96G28	342 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	C7orf26	Q96N11	449 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF347	Q96SE7	839 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	NPAS1	Q99742	590 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	FAM118B	Q9BPY3	351 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	IFT27	Q9BW83	186 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	SCNM1	Q9BWG6	230 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	CADM1	Q9BY67	442 aa	Known RBP	4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	EDEM3	Q9BZQ6	932 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	MROH8	Q9H579	483 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	EXTL2	Q9UBQ6	330 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	HSF4	Q9ULV5	492 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	DDX19B	Q9UMR2	479 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	TBX20	Q9UMR3	447 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	TRAF3IP3	Q9Y228	551 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	EXOC6B	Q9Y2D4	811 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	COL2A1	P02458	1487 aa	Predicted RBP	4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	FOCAD	Q5VW36	1801 aa		4.23	□□□□□ -1.73
LRRC28-222	ENST00000561431	FLT1	P17948	1338 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	TCRBV7S3A2	A0A539	114 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC22A23	A1A5C7	686 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431		M0QX08	132 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CAPN9	O14815	690 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	TSPAN4	O14817	238 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	HBP1	O60381	514 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	KLHL41	O60662	606 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	UGDH	O60701	494 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CBX6	O95503	412 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	HLA-DQA2	P01906	255 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CERS1	P27544	350 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PSMC2	P35998	433 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SKIV2L2	P42285	1042 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARHGAP25	P42331	645 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CYP2J2	P51589	502 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	C21orf58	P58505	322 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	AP1B1	Q10567	949 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CUL4A	Q13619	759 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	BYSL	Q13895	437 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	VGLL4	Q14135	290 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RABEP1	Q15276	862 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SEC23B	Q15437	767 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SUPT20HL1	Q3ZLR7	823 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC9C1	Q4G0N8	1177 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	LRIG3	Q6UXM1	1119 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	BBS12	Q6ZW61	710 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARMC9	Q7Z3E5	817 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CCDC91	Q7Z6B0	441 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZER1	Q7Z7L7	766 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADGRA1	Q86SQ6	560 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	GHDC	Q8N2G8	530 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	OR52K2	Q8NGK3	314 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	KIAA1524	Q8TCG1	905 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	FAM151A	Q8WW52	585 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	USP6NL	Q92738	828 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	MAP4K1	Q92918	833 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	NSUN4	Q96CB9	384 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RRP36	Q96EU6	259 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RNFT2	Q96EX2	444 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	C1orf74	Q96LT6	269 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CCDC43	Q96MW1	224 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	NEK1	Q96PY6	1258 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	SH2D3A	Q9BRG2	576 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	IDI2	Q9BXS1	227 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	NT5C3A	Q9H0P0	336 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	R3HDML	Q9H3Y0	253 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	NCOR1P1	Q9H4R4	102 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	DDX4	Q9NQI0	724 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PIH1D3	Q9NQM4	214 aa	Known RBP	4.22	□□□□□ -1.73

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