RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 MYBPHLA2RUH7 354 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TM7SF2O76062 418 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 VAV1P15498 845 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 SPIBQ01892 262 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ZNHIT3Q15649 155 aaPredicted RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 USP39Q53GS9 565 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PPM1JQ5JR12 505 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TRIM40Q6P9F5 258 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PGAM4Q8N0Y7 254 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ERLEC1Q96DZ1 483 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 FUBP3Q96I24 572 aaKnown RBP eCLIP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TEKT5Q96M29 485 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TMEM175Q9BSA9 504 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ZC4H2Q9NQZ6 224 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 DTLQ9NZJ0 730 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 C3orf18Q9UK00 162 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 GMPPBQ9Y5P6 360 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 COPG1Q9Y678 874 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PNMA8CA0A1B0GUJ8 204 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 SCAMP3O14828 347 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PER2O15055 1255 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 SLC35G4P0C7Q5 338 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TCF3P15923 654 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 OGNP20774 298 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 HCAR3P49019 387 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ST13P50502 369 aaKnown RBP6.91□□□□□ -1.3
AP4E1-203ENST00000560508 RIPK1Q13546 671 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ZNF792Q3KQV3 632 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 PDZK1Q5T2W1 519 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 METTL21CQ5VZV1 264 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 FSTL4Q6MZW2 842 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 CLEC20AQ6ZU45 233 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 GPR180Q86V85 440 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 GATAD2AQ86YP4 633 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ASZ1Q8WWH4 475 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 AGAP2Q99490 1192 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 TMEM59LQ9UK28 342 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 IKZF3Q9UKT9 509 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 ZNF780BQ9Y6R6 833 aa6.91□□□□□ -1.3
AP4E1-203ENST00000560508 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 MED26O95402 600 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 HOXD13P35453 343 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SLC20A2Q08357 652 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 GRB14Q14449 540 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CHMP1BQ7LBR1 199 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 FGD2Q7Z6J4 655 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PIGWQ7Z7B1 504 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 TBC1D21Q8IYX1 336 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 LRTM1Q9HBL6 345 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ATP6V1HQ9UI12 483 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 FBXL21Q9UKT6 434 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SAMD4AQ9UPU9 718 aaKnown RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 COL18A1P39060 1754 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PTGES3LE9PB15 166 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PRMT5O14744 637 aaPredicted RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 APODP05090 189 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 UGT2B15P54855 530 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ITGA1P56199 1179 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 AP1S1P61966 158 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ELP6Q0PNE2 266 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ALFQ53S48 1182 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CIR1Q86X95 450 aaPredicted RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 GPR156Q8NFN8 814 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SPATA22Q8NHS9 363 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 BRSK1Q8TDC3 778 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PPCDCQ96CD2 204 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PANX1Q96RD7 426 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ZNF607Q96SK3 696 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 ROGDIQ9GZN7 287 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 C6orf62Q9GZU0 229 aaPredicted RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 HDHD2Q9H0R4 259 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SERHL2Q9H4I8 314 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 POLR1BQ9H9Y6 1135 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SERHLQ9NQF3 203 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 RHBDL2Q9NX52 303 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 FNIP2Q9P278 1114 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 GTF2A1LQ9UNN4 478 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CLDN9O95484 217 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 FEN1P39748 380 aaKnown RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 PNLIPRP1P54315 467 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 C21orf59P57076 290 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CA9Q16790 459 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 TIMM50Q3ZCQ8 353 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 SULT1C3Q6IMI6 304 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CAPN13Q6MZZ7 669 aaPredicted RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 RFWD3Q6PCD5 774 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 CPSF7Q8N684 471 aaKnown RBP6.9□□□□□ -1.3
AP4E1-203ENST00000560508 OR2T34Q8NGX1 318 aa6.9□□□□□ -1.3
AP4E1-203ENST00000560508 OR2T3Q8NH03 318 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms