RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TBPL2Q6SJ96 375 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PRSS48Q7RTY5 328 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 AMIGO1Q86WK6 493 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 DAW1Q8N136 415 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 FAM84AQ96KN4 292 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 GAD1Q99259 594 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 C6orf62Q9GZU0 229 aaPredicted RBP19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 ZC4H2Q9NQZ6 224 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 GABBR1Q9UBS5 961 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PSAT1Q9Y617 370 aa19.1■□□□□ 0.65
SEMA4B-215ENST00000560089 PARP14Q460N5 1801 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PCMT1P22061 227 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 RFC2P35250 354 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 NPTX2P47972 431 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 CNTN2Q02246 1040 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 C6orf141Q5SZD1 244 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PNCKQ6P2M8 343 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 DPY19L3Q6ZPD9 716 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 VN1R5Q7Z5H4 357 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 RIOX2Q8IUF8 465 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 C7orf57Q8NEG2 295 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 VPS37AQ8NEZ2 397 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PHOX2BQ99453 314 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PCDHB3Q9Y5E6 796 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PDGFAP04085 211 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 CYP3A4P08684 503 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 LIG4P49917 911 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 ETV1P50549 477 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 INCA1Q0VD86 236 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 TOP3AQ13472 1001 aaPredicted RBP19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 MEP1AQ16819 746 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 CASC4Q6P4E1 433 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 MAMSTRQ6ZN01 415 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 EID3Q8N140 333 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 RORBQ92753 470 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 RHOBTB2Q9BYZ6 727 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 TM9SF3Q9HD45 589 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 SNX15Q9NRS6 342 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 GLTPQ9NZD2 209 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
SEMA4B-215ENST00000560089 PABPN1LA6NDY0 278 aaKnown RBP19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 A8MUA0 341 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 ARHGEF9O43307 516 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 GOT2P00505 430 aaKnown RBP19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 PSMA2P25787 234 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 GRIA4P48058 902 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 MAPK12P53778 367 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 SLC25A11Q02978 314 aaKnown RBP19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 PON2Q15165 354 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 BRDTQ58F21 947 aaPredicted RBP19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 FAM45BPQ6NSW5 357 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 TMEM270Q6UE05 265 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 FAM45AQ8TCE6 357 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 ZNF300Q96RE9 604 aaPredicted RBP19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 ROGDIQ9GZN7 287 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 DPP3Q9NY33 737 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 TNFRSF10DQ9UBN6 386 aa19.08■□□□□ 0.65
SEMA4B-215ENST00000560089 WDR90Q96KV7 1748 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 H0Y626 953 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 ZNF254O75437 659 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 HADHQ16836 314 aaKnown RBP19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 CYP51A1Q16850 503 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 ZNF404Q494X3 552 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 SLC2A14Q8TDB8 520 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 FAR1Q8WVX9 515 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 FTHL17Q9BXU8 183 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 ERVMER34-1Q9H9K5 563 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 RANGRFQ9HD47 186 aaPredicted RBP19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 IL20Q9NYY1 176 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 OPTCQ9UBM4 332 aa19.08■□□□□ 0.64
SEMA4B-215ENST00000560089 SERPINI2O75830 405 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 LDLRP01130 860 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 CALB1P05937 261 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 SNRPB2P08579 225 aaKnown RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 TALDO1P37837 337 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 ARHGEF16Q5VV41 709 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 ZNF517Q6ZMY9 492 aaPredicted RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 CHDHQ8NE62 594 aaPredicted RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 TMEM174Q8WUU8 243 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 FYTTD1Q96QD9 318 aaKnown RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 OSGIN1Q9UJX0 560 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 MT-ND1P03886 318 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 TGFBR1P36897 503 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 GHRHRQ02643 423 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 NOMO1Q15155 1222 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 PLEKHM3Q6ZWE6 761 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 PARP16Q8N5Y8 322 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 GLB1L3Q8NCI6 653 aaPredicted RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 HMGCLL1Q8TB92 370 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 ZHX1-C8orf76Q96EF9 292 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 UCK2Q9BZX2 261 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 MMP27Q9H306 513 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 SERHL2Q9H4I8 314 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 KCNH7Q9NS40 1196 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 POLR3BQ9NW08 1133 aaPredicted RBP19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 ADAMTS5Q9UNA0 930 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 GRIP1Q9Y3R0 1128 aa19.07■□□□□ 0.64
SEMA4B-215ENST00000560089 CCDC154A6NI56 674 aa19.06■□□□□ 0.64
SEMA4B-215ENST00000560089 FAM25EA8MYX2 175 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms