RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ARPC4-TTLL3A0A0A6YYG9 625 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 AIREO43918 545 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 GMFGO60234 142 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 RPLP0P05388 317 aaKnown RBP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 S100A10P60903 97 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 RAB39AQ14964 217 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 CPTPQ5TA50 214 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 ADAMTSL2Q86TH1 951 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF565Q8N9K5 539 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 VCPIP1Q96JH7 1222 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 B3GNT4Q9C0J1 378 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 ABI3Q9P2A4 366 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 PCDHGB2Q9Y5G2 931 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 TRPV2Q9Y5S1 764 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 H0Y858 1186 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 H3BUI4 141 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 PTPN11Q06124 597 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 THAP5Q7Z6K1 395 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 CEP41Q9BYV8 373 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 PLAGL2Q9UPG8 496 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 WASHC1A8K0Z3 465 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 WASH3PC4AMC7 463 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 C1QTNF3-AMACRE9PGA6 284 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 VNN2O95498 520 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 LINC00032P0C843 101 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 ERP29P30040 261 aaKnown RBP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 RAB10P61026 200 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 HERC3Q15034 1050 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 WASH2PQ6VEQ5 465 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 ACMSDQ8TDX5 336 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 TOP1MTQ969P6 601 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 MCCC2Q9HCC0 563 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 PTPRTO14522 1441 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 CARNS1A5YM72 827 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 NOTOA8MTQ0 251 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 FPGTO14772 594 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 KLHL22Q53GT1 634 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 KLHL35Q6PF15 583 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 VANGL1Q8TAA9 524 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 TBC1D10AQ9BXI6 508 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 RPL26L1Q9UNX3 145 aaKnown RBP13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 RAP2CQ9Y3L5 183 aa13.81□□□□□ -0.2
CSPG4P12-202ENST00000559989 CSN2P05814 226 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ECT2LQ008S8 904 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 TMEM44Q2T9K0 475 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 DNAJA2O60884 412 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 MAPK8P45983 427 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 CBLBQ13191 982 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 TAPBPLQ9BX59 468 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ANKRA2Q9H9E1 313 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 LRATO95237 230 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 NPTX2P47972 431 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 HSPA14Q0VDF9 509 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 RRP1BQ14684 758 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC16A9Q7RTY1 509 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 NUP54Q7Z3B4 507 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 CFAP206Q8IYR0 622 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 PTGR2Q8N8N7 351 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 EDEM1Q92611 657 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 BRINP2Q9C0B6 783 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 KCNH7Q9NS40 1196 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 PALLDQ8WX93 1383 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC9A3R1O14745 358 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 AMIGO2Q86SJ2 522 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 GPATCH1Q9BRR8 931 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ETNK2Q9NVF9 386 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ERAL1O75616 437 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ITGB1P05556 798 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 RAB4AP20338 218 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 P2RY8Q86VZ1 359 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 TAMM41Q96BW9 452 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR6C70A6NIJ9 312 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 MAP3K8P41279 467 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 POMZP3Q6PJE2 187 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 PAMR1Q6UXH9 720 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 FAM47BQ8NA70 645 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 HCAR2Q8TDS4 363 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 ELOVL4Q9GZR5 314 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 RGCCQ9H4X1 137 aa13.8□□□□□ -0.2
CSPG4P12-202ENST00000559989 WDR37Q9Y2I8 494 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms