RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 SGCGQ13326 291 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 DPYSQ14117 519 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 BBS9Q3SYG4 887 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 ARHGAP36Q6ZRI8 547 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 PTAR1Q7Z6K3 402 aaPredicted RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 TAX1BP1Q86VP1 789 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 ZSWIM9Q86XI8 627 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 DCP2Q8IU60 420 aaKnown RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 OR4C6Q8NH72 309 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 MGARPQ8TDB4 240 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 PKNOX2Q96KN3 472 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 SERPINB12Q96P63 405 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CCDC86Q9H6F5 360 aaKnown RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CNOT10Q9H9A5 744 aaKnown RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 DONSONQ9NYP3 566 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 PNMA8BQ9ULN7 279 aaPredicted RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 SMG1Q96Q15 3661 aaKnown RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 TRPM6Q9BX84 2022 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 A0A087WUV0 522 aaPredicted RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 TSPAN11A1L157 253 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 ANKRD65E5RJM6 399 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 EBAG9O00559 213 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 NEMP1O14524 444 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 MMP20O60882 483 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 PIAS1O75925 651 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CSF2P04141 144 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CDK4P11802 303 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CREB1P16220 341 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 RABIFP47224 123 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 HCAR3P49019 387 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 ARL4CP56559 192 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 GBE1Q04446 702 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 RAD51Q06609 339 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 FNBP1LQ5T0N5 605 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 FAXCQ5TGI0 409 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 DENND6BQ8NEG7 585 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 FAF2Q96CS3 445 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 NSMCE3Q96MG7 304 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 CCT8L2Q96SF2 557 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 ZNF670Q9BS34 389 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
IDH3A-217ENST00000559889 INTS9Q9NV88 658 aaKnown RBP9.13□□□□□ -0.95
IDH3A-217ENST00000559889 APC2O95996 2303 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 LY6G6EA0A0G2JKS1 128 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 GMNCA6NCL1 334 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 FPGTO14772 594 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 NDC80O14777 642 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 MUSKO15146 869 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 FFAR2O15552 330 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CDH16O75309 829 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TMEM63AO94886 807 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 NME1P15531 152 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TGM2P21980 687 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 AMPD1P23109 780 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ATP5DP30049 168 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 IGFALSP35858 605 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ARL4AP40617 200 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 MMP13P45452 471 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SF3A3Q12874 501 aaKnown RBP eCLIP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 EIF2B5Q13144 721 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ILKQ13418 452 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PDE1CQ14123 709 aaPredicted RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 LRRC14Q15048 493 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TMED2Q15363 201 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 DPYSL2Q16555 572 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 MSS51Q4VC12 460 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PARGQ86W56 976 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PDIK1LQ8N165 341 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 NAT8LQ8N9F0 302 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TP53I13Q8NBR0 393 aaPredicted RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 HCAR2Q8TDS4 363 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 DYDC1Q8WWB3 177 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TTC25Q96NG3 672 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SUV39H2Q9H5I1 410 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 MLXIPLQ9NP71 852 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 MBNL1Q9NR56 388 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 DNAJC28Q9NX36 388 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 U3KQA8 63 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ARHGAP42A6NI28 874 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SCAMP1O15126 338 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 NEBLO76041 1014 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SSTR1P30872 391 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CSNK1DP48730 415 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 UGP2Q16851 508 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 TMEM52BQ4KMG9 183 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 SLC9A4Q6AI14 798 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CAMK1DQ8IU85 385 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PALM2Q8IXS6 379 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 CYP4X1Q8N118 509 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ANKRD42Q8N9B4 389 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 FBXO36Q8NEA4 188 aa9.12□□□□□ -0.95
IDH3A-217ENST00000559889 ZNF548Q8NEK5 533 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms