RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 HENMT1Q5T8I9 393 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 HES3Q5TGS1 186 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ANKRD20A1Q5TYW2 823 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ANKRD20A3Q5VUR7 823 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PDPK2PQ6A1A2 396 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 DOK6Q6PKX4 331 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ADAMTSL4Q6UY14 1074 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 KDM7AQ6ZMT4 941 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ZNF662Q6ZS27 426 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ARHGEF18Q6ZSZ5 1173 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 LYSMD3Q7Z3D4 306 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GLT6D1Q7Z4J2 308 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TMC3Q7Z5M5 1100 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GALNT13Q8IUC8 556 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PHYKPLQ8IUZ5 450 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ZNF567Q8N184 647 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CACTIN-AS1Q8N1I8 211 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CCDC89Q8N998 374 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 FAM46DQ8NEK8 389 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 IPMKQ8NFU5 416 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GDAP1Q8TB36 358 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 IFI44Q8TCB0 444 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 BRSK1Q8TDC3 778 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 BLOC1S5Q8TDH9 187 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PTCD2Q8WV60 388 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 OR1E3Q8WZA6 343 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GRAMD1AQ96CP6 724 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 NXPE2Q96DL1 559 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PDXPQ96GD0 296 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 NSMCE3Q96MG7 304 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SPATA13Q96N96 652 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 DEPDC7Q96QD5 511 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 RIOK2Q9BVS4 552 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 BOCQ9BWV1 1114 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 FRMD8P1Q9BZ68 369 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 ZCCHC2Q9C0B9 1178 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 TMEM168Q9H0V1 697 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ABCG8Q9H221 673 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GBA3Q9H227 469 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CARD9Q9H257 536 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TCEAL2Q9H3H9 227 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 STN1Q9H668 368 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 CCDC86Q9H6F5 360 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 SUDS3Q9H7L9 328 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 RMI1Q9H9A7 625 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 FGF22Q9HCT0 170 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 MRPL40Q9NQ50 206 aaKnown RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 SIRPGQ9P1W8 387 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 VPS18Q9P253 973 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 TRIM10Q9UDY6 481 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ZNHIT2Q9UHR6 403 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 FEZ2Q9UHY8 353 aaPredicted RBP4.35□□□□□ -1.71
SNX1-205ENST00000559339 SUFUQ9UMX1 484 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GPR34Q9UPC5 381 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 WASF3Q9UPY6 502 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SHOC2Q9UQ13 582 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 SLC17A4Q9Y2C5 497 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 ZNF711Q9Y462 761 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 GPSM3Q9Y4H4 160 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 PCDHGA4Q9Y5G9 962 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 AK5Q9Y6K8 562 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 CAPN6Q9Y6Q1 641 aa4.35□□□□□ -1.71
SNX1-205ENST00000559339 KNTC1P50748 2209 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 A0A0U1RQS6 177 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LOC285095A0A1B0GVY8 99 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 FAM149AA5PLN7 773 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TRABD2BA6NFA1 517 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 RHPN2P1A8MT19 583 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 B4DGG1 531 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 E7EVH7 732 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 F5H423 210 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 TMX2-CTNND1H3BSU7 103 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 STX7O15400 261 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 DDX3YO15523 660 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 PSMD3O43242 534 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZSCAN12O43309 604 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GRID2O43424 1007 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 VEGFDO43915 354 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 OPA1O60313 960 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 CDK14O94921 469 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 MT-CO3P00414 261 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SOD1P00441 154 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 IFNB1P01574 187 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ATP1A1P05023 1023 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 IVLP07476 585 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PIRTP0C851 137 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 RALBP11234 206 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GM2AP17900 193 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 VCLP18206 1134 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LPOP22079 712 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 CD68P34810 354 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 SPAM1P38567 509 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 HADHAP40939 763 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ACTR1BP42025 376 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LMAN1P49257 510 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PPM1FP49593 454 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 ACTR1AP61163 376 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 INSM1Q01101 510 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 KLF1Q13351 362 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 LAMB3Q13751 1172 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms