RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 KIAA1522Q9P206 1035 aaPredicted RBP11.24□□□□□ -0.61
CLPX-204ENST00000559152 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 FIS1Q9Y3D6 152 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 PCDHB1Q9Y5F3 818 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
CLPX-204ENST00000559152 STX16-NPEPL1H3BU86 382 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 STX16O14662 325 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 LILRB3O75022 631 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 VPS4BO75351 444 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 BAG2O95816 211 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 TIMP1P01033 207 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 GABRR2P28476 465 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 IL2P60568 153 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 STX1BP61266 288 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 WDR5P61964 334 aaKnown RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 CDC16Q13042 620 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 OR4D1Q15615 310 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ZRANB3Q5FWF4 1079 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 TMEM198Q66K66 360 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 TXNDC8Q6A555 127 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 EFL1Q7Z2Z2 1120 aaKnown RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 HPS6Q86YV9 775 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 FBXO39Q8N4B4 442 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ADAMTS19Q8TE59 1207 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 RCN3Q96D15 328 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 VWCEQ96DN2 955 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ALG14Q96F25 216 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 GPR63Q9BZJ6 419 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 LRCH1Q9Y2L9 728 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ZNF711Q9Y462 761 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 COL4A6Q14031 1691 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 TRAV19A0A0A6YYK7 116 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 SUPT3HB4E1H0 165 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 E5RI56 91 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 PSMD12O00232 456 aaPredicted RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 SOCS5O75159 536 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 SUPT3HO75486 399 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 PDE5AO76074 875 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 PGLSO95336 258 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 CKMP06732 381 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 CTSAP10619 480 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 MTHFD2P13995 350 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ACADVLP49748 655 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 DEFB103AP81534 67 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 LCP2Q13094 533 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 FASTKQ14296 549 aaKnown RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 PPM1LQ5SGD2 360 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ANKS6Q68DC2 871 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 EXT2Q93063 718 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 C19orf60Q96EN9 201 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 MYO19Q96H55 970 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 BIRC8Q96P09 236 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 SLC22A12Q96S37 553 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 ZNF184Q99676 751 aaPredicted RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 GPR21Q99679 349 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 C1QTNF3Q9BXJ4 246 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 WDR41Q9HAD4 459 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 IL17CQ9P0M4 197 aa11.23□□□□□ -0.61
CLPX-204ENST00000559152 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
CLPX-204ENST00000559152 H3BMM5 538 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 UBXN8O00124 270 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 UBFD1O14562 309 aaKnown RBP11.22□□□□□ -0.61
CLPX-204ENST00000559152 AZIN1O14977 448 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 KLK8O60259 260 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 MLYCDO95822 493 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 CYBBP04839 570 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 LBX1P52954 281 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 BCL2L1Q07817 233 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 PEX6Q13608 980 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 CCNIQ14094 377 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 GEN1Q17RS7 908 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 TRIM68Q6AZZ1 485 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 LARP4Q71RC2 724 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLPX-204ENST00000559152 TAS2R42Q7RTR8 314 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 SH3RF2Q8TEC5 729 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 AUTS2Q8WXX7 1259 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 CCDC124Q96CT7 223 aaKnown RBP11.22□□□□□ -0.61
CLPX-204ENST00000559152 CDRT15Q96T59 188 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 SLC25A23Q9BV35 468 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 APPL1Q9UKG1 709 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 MED16Q9Y2X0 877 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 WASF2Q9Y6W5 498 aa11.22□□□□□ -0.61
CLPX-204ENST00000559152 TGM5O43548 720 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
CLPX-204ENST00000559152 CDK14O94921 469 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 IGSF6O95976 241 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 ADH1AP07327 375 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 SNRPB2P08579 225 aaKnown RBP11.21□□□□□ -0.61
CLPX-204ENST00000559152 CHRM3P20309 590 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 ME2P23368 584 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 SH3BP2P78314 561 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms