RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CES5AQ6NT32 575 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TCTN3Q6NUS6 607 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 KDELC1Q6UW63 502 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 QSOX2Q6ZRP7 698 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 DET1Q7L5Y6 550 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 PPP1R42Q7Z4L9 355 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ADIPOR2Q86V24 386 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 IGFN1Q86VF2 1251 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TMC8Q8IU68 726 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 C4orf19Q8IY42 314 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 SAMD14Q8IZD0 417 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 FBXO39Q8N4B4 442 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 GJC3Q8NFK1 279 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 OR4N2Q8NGD1 307 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CCDC110Q8TBZ0 833 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 WIPF2Q8TF74 440 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 SLC13A3Q8WWT9 602 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 KAT2BQ92831 832 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ATOH1Q92858 354 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 EXT2Q93063 718 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 MIB2Q96AX9 1013 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 RNF183Q96D59 192 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 RBM18Q96H35 190 aaKnown RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 FAM111AQ96PZ2 611 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 SH3GL2Q99962 352 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 FAM110AQ9BQ89 295 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TMEM79Q9BSE2 394 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 THAP7Q9BT49 309 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 ABHD6Q9BV23 337 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CIPCQ9C0C6 399 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ZNF350Q9GZX5 532 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HSD3B7Q9H2F3 369 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 HIPK3Q9H422 1215 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CHMP1AQ9HD42 196 aaPredicted RBP3.82□□□□□ -1.8
TDP1-217ENST00000557782 ZBTB40Q9NUA8 1239 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 CYP39A1Q9NYL5 469 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ERVK-11Q9UQG0 969 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 PCDHGA5Q9Y5G8 931 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 PCDHGA1Q9Y5H4 931 aa3.82□□□□□ -1.8
TDP1-217ENST00000557782 ATAD2BQ9ULI0 1458 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ACEP12821 1306 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SMIM30A4D0T7 59 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NPEPPSL1A6NEC2 478 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SLC9B1P1A6NJY1 282 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CGB1A6NKQ9 187 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 YDJCA8MPS7 323 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 VWC2LB2RUY7 222 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 KLRF2D3W0D1 207 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 H0YIZ8 118 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ATP2A1O14983 1001 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 MPPED1O15442 326 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 VEGFDO43915 354 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NOBOXO60393 691 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PRAMEF11O60813 436 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 TMCC1O94876 653 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SPDEFO95238 335 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 MOCS3O95396 460 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NFATC1O95644 943 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 GH2P01242 217 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CCDC192P0DO97 292 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 MED14OSP0DP75 135 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ETFAP13804 333 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ARF4P18085 180 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 SRD5A1P18405 259 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ITIH1P19827 911 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CCNA2P20248 432 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 COMTP21964 271 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 TNFRSF8P28908 595 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PCSK6P29122 969 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SLC16A2P36021 539 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CLCN5P51795 746 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ATXN3P54252 364 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 SLC26A5P58743 744 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 GMFBP60983 142 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 AKAP17AQ02040 695 aaKnown RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 SREBF2Q12772 1141 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 HSPB3Q12988 150 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 KPNB1Q14974 876 aaKnown RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 PDK1Q15118 436 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 INAQ16352 499 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PFKFB3Q16875 520 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 PNLIPRP3Q17RR3 467 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 HFEQ30201 348 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ZNF789Q5FWF6 425 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PCID2Q5JVF3 399 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ZBTB49Q6ZSB9 765 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 INTS8Q75QN2 995 aaKnown RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CCDC25Q86WR0 208 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CIR1Q86X95 450 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 RASAL3Q86YV0 1011 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 RFX6Q8HWS3 928 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 TMEM151BQ8IW70 566 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SFRP1Q8N474 314 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ZBTB2Q8N680 514 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 TP53I13Q8NBR0 393 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms