RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ILF2Q12905 390 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 OGFOD2Q6N063 350 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 NANOGP8Q6NSW7 305 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 PDPRQ8NCN5 879 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 NRBF2Q96F24 287 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 BDH2Q9BUT1 245 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 ZFYVE28Q9HCC9 887 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 ATP13A1Q9HD20 1204 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC52A3Q9NQ40 469 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 ZNF639Q9UID6 485 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 PPP6CO00743 305 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 IRAK2O43187 625 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 BCL10O95999 233 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 IGLV3-25P01717 112 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 LINC00032P0C843 101 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 NCK1P16333 377 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 JUNBP17275 347 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 BCAP31P51572 246 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 BMXP51813 675 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 PFKFB4Q16877 469 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 RABL3Q5HYI8 236 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 MANEALQ5VSG8 457 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 CHST15Q7LFX5 561 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SPATA19Q7Z5L4 167 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SFRP1Q8N474 314 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 CHPT1Q8WUD6 406 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 TRUB1Q8WWH5 349 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 TANKQ92844 425 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 ZFP42Q96MM3 310 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SOX17Q9H6I2 414 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 CSNK1G1Q9HCP0 422 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 PFDN4Q9NQP4 134 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 POLR3BQ9NW08 1133 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 OAS3Q9Y6K5 1087 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-211ENST00000557658 UBXN8O00124 270 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 CRCPO75575 148 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 SNAI1O95863 264 aaPredicted RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 MBL2P11226 248 aaPredicted RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 FDXRP22570 491 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 ITKQ08881 620 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 TUBA3CQ13748 450 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 BROXQ5VW32 411 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 IL31Q6EBC2 164 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 ZC3H7AQ8IWR0 971 aaKnown RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 PPP1R13LQ8WUF5 828 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 MYLPFQ96A32 169 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 IMP4Q96G21 291 aaKnown RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 FCRL2Q96LA5 508 aaPredicted RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 KCNA7Q96RP8 456 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC30A3Q99726 388 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 FANCEQ9HB96 536 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 GMIPQ9P107 970 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 MARCH4Q9P2E8 410 aaPredicted RBP11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 CACNG4Q9UBN1 327 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 SEPT3Q9UH03 358 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 BTRCQ9Y297 605 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.52
VIPAS39-211ENST00000557658 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 LRRC14BA6NHZ5 514 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 ADM5C9JUS6 153 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 H3BMM5 538 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 K7EPI3 171 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 CCL22O00626 93 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 SERPINB7O75635 380 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 MATN1P21941 496 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 BDNFP23560 247 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 PCSK1P29120 753 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 CCR1P32246 355 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 ARSDP51689 593 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 APLP1P51693 650 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 GRIK2Q13002 908 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 ATP1A4Q13733 1029 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 NR1D2Q14995 579 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 FUT11Q495W5 492 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 AFMIDQ63HM1 303 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 PROSER1Q86XN7 944 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 SCML4Q8N228 414 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 RHEBL1Q8TAI7 183 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 RAB2BQ8WUD1 216 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 VPS33AQ96AX1 596 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 BIRC7Q96CA5 298 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 NSUN5Q96P11 429 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 SEPHS2Q99611 448 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 TDRD1Q9BXT4 1180 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 ING2Q9H160 280 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 NT5MQ9NPB1 228 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms