RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 C6orf132Q5T0Z8 1188 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 DRICH1Q6PGQ1 229 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-209ENST00000557342 RANBP10Q6VN20 620 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 GLT6D1Q7Z4J2 308 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 KLHDC8BQ8IXV7 354 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 PNPLA1Q8N8W4 532 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 BLOC1S5Q8TDH9 187 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 C1orf54Q8WWF1 131 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 ATG4AQ8WYN0 398 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 EID2BQ96D98 161 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 RTP4Q96DX8 246 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 PBKQ96KB5 322 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 WDR24Q96S15 920 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 AGAP2Q99490 1192 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 GORASP1Q9BQQ3 440 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 CLPBQ9H078 707 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 MRPL40Q9NQ50 206 aaKnown RBP12.42□□□□□ -0.42
SLIRP-209ENST00000557342 HOMER3Q9NSC5 361 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 SLC17A4Q9Y2C5 497 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 SPO11Q9Y5K1 396 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
SLIRP-209ENST00000557342 MYLKQ15746 1914 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 INPP4BO15327 924 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 YY2O15391 372 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 PPFIA2O75334 1257 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 FGGP02679 453 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 CKMT1AP12532 417 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 GDF10P55107 478 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 PDE1BQ01064 536 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 E2F1Q01094 437 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 SNX1Q13596 522 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 PEX6Q13608 980 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 NR0B2Q15466 257 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 LONRF2Q1L5Z9 754 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 GALNT15Q8N3T1 639 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 GPR26Q8NDV2 337 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 COX14Q96I36 57 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 BOCQ9BWV1 1114 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 CARS2Q9HA77 564 aaKnown RBP12.41□□□□□ -0.42
SLIRP-209ENST00000557342 TRNAU1APQ9NX07 287 aaKnown RBP12.41□□□□□ -0.42
SLIRP-209ENST00000557342 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
SLIRP-209ENST00000557342 VPS18Q9P253 973 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
SLIRP-209ENST00000557342 PKP3Q9Y446 797 aa12.41□□□□□ -0.42
SLIRP-209ENST00000557342 C2orf81A6NN90 581 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 AURKAO14965 403 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 HYAL3O43820 417 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 METTL18O95568 372 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ASMTLO95671 621 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CRTAMO95727 393 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 GP1BAP07359 652 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 BPIP17213 487 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CXCR5P32302 372 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 FDFT1P37268 417 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SPAM1P38567 509 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 GNPDA1P46926 289 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ILF3Q12906 894 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SIX1Q15475 284 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 TAF1AQ15573 450 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ALS2CLQ60I27 953 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 KCTD11Q693B1 232 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 C4orf22Q6V702 233 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 LINC00523Q86TU6 105 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SLC35F6Q8N357 371 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CHCHD4Q8N4Q1 142 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 BRSK1Q8TDC3 778 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SCARF2Q96GP6 870 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 NAP1L3Q99457 506 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 TMEM168Q9H0V1 697 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ARNT2Q9HBZ2 717 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 PAK5Q9P286 719 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 CNOT6Q9ULM6 557 aaKnown RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 NEUROG3Q9Y4Z2 214 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-209ENST00000557342 PLXNB3Q9ULL4 1909 aa12.4□□□□□ -0.42
SLIRP-209ENST00000557342 FAM221BA6H8Z2 402 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 STX7O15400 261 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms