RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SMIM14Q96QK8 99 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 PAFAH2Q99487 392 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 CD320Q9NPF0 282 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 IL26Q9NPH9 171 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 MED4Q9NPJ6 270 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 INTS10Q9NVR2 710 aaKnown RBP9.18□□□□□ -0.94
ACTN1-218ENST00000556343 SPATA6Q9NWH7 488 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-218ENST00000556343 USP36Q9P275 1121 aaKnown RBP9.18□□□□□ -0.94
ACTN1-218ENST00000556343 NFKBIL1Q9UBC1 381 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-218ENST00000556343 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
ACTN1-218ENST00000556343 COMMD10Q9Y6G5 202 aa9.18□□□□□ -0.94
ACTN1-218ENST00000556343 MIA3Q5JRA6 1907 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 COL4A3Q01955 1670 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 IGLON5A6NGN9 336 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 FAM47DPA6NHR8 397 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 H3BMM5 538 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 QSOX1O00391 747 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PLK4O00444 970 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 RNGTTO60942 597 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 RECQL5O94762 991 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 IGLV3-19P01714 112 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 MT-ND3P03897 115 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SHBGP04278 402 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 DCNP07585 359 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 C6P13671 934 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 KRT15P19012 456 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 AOC1P19801 751 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 CD6P30203 668 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ETV3P41162 512 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PTGER3P43115 390 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 GPR1P46091 355 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SLCO1A2P46721 670 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 LEPRP48357 1165 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ARSDP51689 593 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 METAP1P53582 386 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ADPRHP54922 357 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 XIAPP98170 497 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 DPTQ07507 201 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ZNF844Q08AG5 666 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 MTAPQ13126 283 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 NFATC2Q13469 925 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ITIH4Q14624 930 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PTPRCAPQ14761 206 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 LRRC14Q15048 493 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 AGERQ15109 404 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PTPRRQ15256 657 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 CHRNA6Q15825 494 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 AGBL2Q5U5Z8 902 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 FAM151BQ6UXP7 276 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PACS1Q6VY07 963 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SLC36A4Q6YBV0 504 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 Q6ZVL8 140 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 HSD11B1LQ7Z5J1 315 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 FAM124AQ86V42 546 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 C11orf74Q86VG3 221 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 CILP2Q8IUL8 1156 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 GPR26Q8NDV2 337 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 GDAP1Q8TB36 358 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 TSPAN17Q96FV3 270 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PGM2Q96G03 612 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 HHIPQ96QV1 700 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 COPS8Q99627 209 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 TRIM56Q9BRZ2 755 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 RIOK2Q9BVS4 552 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 TSSK1BQ9BXA7 367 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SLC17A9Q9BYT1 436 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ZCCHC2Q9C0B9 1178 aaKnown RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PCED1AQ9H1Q7 454 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 ABCG8Q9H221 673 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 RHOJQ9H4E5 214 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SUDS3Q9H7L9 328 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-218ENST00000556343 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 PCDHB1Q9Y5F3 818 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 NFS1Q9Y697 457 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 COL4A2P08572 1712 aa9.17□□□□□ -0.94
ACTN1-218ENST00000556343 A0A1W2PQU0 124 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 CXorf49A8MYA2 514 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-218ENST00000556343 HMGB1P1B2RPK0 211 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-218ENST00000556343 GOLGA8TH3BQL2 631 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 AXIN1O15169 862 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 LAMTOR5O43504 91 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 SEMA4FO95754 770 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 AHSGP02765 367 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 MSH3P20585 1137 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 ACRV1P26436 265 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 ARNTP27540 789 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 TEAD1P28347 426 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 HOXA6P31267 233 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 FOXN2P32314 431 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 NSG1P42857 185 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 SLC1A2P43004 574 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 CCR5P51681 352 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 TAS2R38P59533 333 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 CTBP1Q13363 440 aa9.16□□□□□ -0.94
ACTN1-218ENST00000556343 PEX6Q13608 980 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms